Ipomoea nil (Japanese morning glory): 109189651
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Entry
109189651 CDS
T04663
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Module
ini_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109189651
Enzymes [BR:
ini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109189651
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
CBM_3
DUF3737
Motif
Other DBs
NCBI-GeneID:
109189651
NCBI-ProteinID:
XP_019195810
LinkDB
All DBs
Position
Un
AA seq
399 aa
AA seq
DB search
MVRFMVLLASVIALLLCNIGYAASHPPTSSVSYNVVNFGAKPDGKTESTQAFLRAWASAC
RSLRPATVYVPKGNYLLKAVVFNGPCKNRITVRIDGTLVAPTDYWALGNSGYWILFSKVD
RISVIGGKIDAKGAGFWACRNSRKNCPVVGARSMTFKRVNGLEVNGLQSLNSQTMHLVIN
HCKNVVIRNVRIIAPDKSPNTDGIHVQHSTGITITSSSLKTGDDCVSIGPGTTNMFMDRL
VCGPGHGISIGSLGRFAVEVGVQNVTLINSLFVGSQNGIRIKSWARPSTGFVKNINYRNI
VMKHVKNPIIIDQNYCPNNIGCPKQTSGIKISGVTYKNIQGTSKTKVAMTFDCSPSQKCR
GIKLQDIKLKYYLNNQKAQSTCKNIQGTTTGVILPYKCL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggtgagatttatggtattattggcttctgttattgcattgttgttatgtaacatagga
tatgcagcgtcacatccaccaacatcatcggtatcatacaacgtggtaaactttggggca
aaacccgacggaaaaaccgagtcgactcaggcgtttctgcgcgcttgggcgtcggcatgc
aggtcactccggccggcaacagtttacgtgcccaagggcaattacttgcttaaggcagtg
gtgttcaacgggccatgcaagaacagaatcacggtgcgaatcgacggcacgctcgttgct
cctaccgattattgggccttgggaaactccggctactggatcttgtttagtaaagtcgac
aggatttcggtcatcggcggcaagattgacgccaagggagctggcttctgggcttgccgg
aattcccgcaagaattgccccgtcgtcggagcaaggtcgatgacattcaaaagggtaaat
ggcctggaggtgaatggtttacaatccttgaacagtcagacaatgcacctagtaatcaac
cactgcaaaaacgttgtaattcgcaacgtgaggataatagccccagataagagtcccaac
accgacggcatccacgtccagcactccaccgggatcaccatcacctctagtagtttgaag
actggcgacgactgcgtatcaatcggtccaggtacaacaaacatgttcatggatcgatta
gtatgtggccctggacatggtatcagtatcggaagtttgggtcggtttgcagtagaagtc
ggtgtgcaaaacgtaacactgataaactctctcttcgtcggatcccaaaatggaatcagg
ataaaatcatgggcacgaccaagtactgggtttgtcaagaacatcaactatcgcaacatt
gttatgaagcatgtgaaaaaccccataatcatcgaccagaactactgtccaaataacatt
ggttgtcctaaacagacatctggaataaaaatcagtggagtgacatataagaacatacaa
ggaacatctaagacaaaagttgcaatgacatttgattgtagccccagccaaaaatgcaga
gggataaagttgcaagatataaagttgaagtattatttgaacaatcagaaggcacaatcc
acctgcaaaaacattcaaggaactaccactggagtcatcttaccatataaatgcctttga
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