Ipomoea nil (Japanese morning glory): 109189701
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Entry
109189701 CDS
T04663
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Module
ini_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109189701
Enzymes [BR:
ini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109189701
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109189701
NCBI-ProteinID:
XP_019195858
LinkDB
All DBs
Position
Un
AA seq
394 aa
AA seq
DB search
MAVSKLCFSVVITFIYVTFASAGSGSYNVQSYGAKPDGKTDSTKAFVAAWAAACASTVPA
TIYVPAGRFLVGSLSFGGQTCKSNAISFQIDGTLVAPSDYNNVVGKSGNWIKFEKVTGVS
ISGGTLDGQGAALWACKNSEKNCPQGATTLAFYNSNNIVISGLSSQNSQMFHILIYGCHN
AKLQGVKISAPGDSPNTDGIHIQSSSGVTILNSHIGTGDDCISIGPGNSNLWIENIACGP
GHGISIGSLGWETEEAGVQNVTVKTATFTGTQNGLRIKTWARPSNGFVRNIVYQHAVMSD
VQNPIIIDQNYCPDGKNCPHQSSGVKISGVTYEDVHGTSATEVAVKFECSKTEPCSEIAV
DYVNLTYKDEKAEASCVNAGGTSSGLVQPVISCF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccaagctttgtttctcagttgtcatcaccttcatctatgtaacatttgca
tcagcaggcagtggtagctacaatgtccagagctatggagcgaaacccgacggcaagact
gactccaccaaggcgtttgtggccgcatgggcggctgcgtgtgcctccaccgttccggcc
accatttacgtgccggcaggaaggttcttggttgggagtttgagttttggggggcaaaca
tgcaagagcaacgccatttcgtttcaaatagatggcacgctcgtggctccatctgattac
aataatgtggttggaaagagtgggaattggatcaaatttgaaaaggtcaccggagtttcc
atttccggcggaaccctagacggccaaggcgccgctctttgggcgtgcaaaaactccgaa
aagaattgccctcaaggggctacgacactggctttttacaactcaaacaacattgttatt
agcggactaagttcccaaaacagccaaatgtttcacatcctcatttacggctgccacaac
gccaagttacaaggagtgaagatctcggctcccggagacagtcccaacaccgacggaatc
cacattcaatcctcgtcaggtgtaacaatcttgaattctcacataggcactggtgacgac
tgtatctccatcggccccggcaactctaacttgtggatcgaaaacattgcctgcggcccc
ggccacggaatcagcattgggagtttaggttgggaaacagaagaggctggagtgcaaaac
gtgacagttaaaaccgctacttttaccggcactcaaaatgggttgaggatcaaaacatgg
gcaagacccagcaatgggtttgtgagaaacattgtttaccaacacgcagtcatgtcggac
gtacaaaaccccatcatcatcgaccaaaattactgccctgacggcaaaaactgtcctcac
cagagctcgggcgtgaagatcagcggcgtaacgtacgaagacgtacatggtacatcggcg
acggaagtggcggtgaaattcgagtgtagtaagacagaaccgtgcagcgaaatagcggtg
gactatgtaaacctcacatacaaagatgagaaggctgaagcgtcctgcgttaacgccggt
gggaccagttccggtttggttcagcctgtaattagctgcttctag
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