Ipomoea nil (Japanese morning glory): 109189705
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Entry
109189705 CDS
T04663
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Module
ini_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109189705
Enzymes [BR:
ini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109189705
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ProQ_C
Motif
Other DBs
NCBI-GeneID:
109189705
NCBI-ProteinID:
XP_019195862
LinkDB
All DBs
Position
Un
AA seq
391 aa
AA seq
DB search
MAAKITDLLLMLLIFLSESCVIILAFNVVDFGANPDGVTDSSEPFLRAWAAACASPEPAV
IYVPPGRYSITQVKFGGKCMSRGIEFLINGTLVAPADYNVIGNVGYWILFDGVDGVFING
GTLDGQGAALWNCKASRKDCPNGATSLGFIHSNNVMVYGLTSVNSQLFHVVILACKNTTL
QGLNIMAPRNSINTDGVHVQFSSGITVVDSNIGTGDDCVSIGPGSTNLWIENIVCGPGHG
ISIGSLGRDYEEKGVQNVTVKMVTFINTQNGARIKTWGRPSTSFVKDVLFQHALMYDVQN
PIIIDQNYCPYNKSSCPGQYSGVKISDVTYEDIRGTSATQVGVRLDCSATNPCRSIKLQD
VMLTYEDGPAEASCVNADGTTSGVIQPMACF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaaatcactgatcttcttctcatgctactcatctttctaagtgaatcatgt
gtcatcatcttagcattcaatgttgttgatttcggggcaaaccctgacggcgtgactgac
tcttcagagccatttttacgggcatgggcggccgcctgtgcctcgccggagccggccgtc
atttacgtgccgccgggaaggtattcaatcacgcaagttaagtttggaggaaagtgcatg
agcagaggcattgaattcttaatcaacggcaccctggttgctcccgccgactataatgtc
atcggaaacgtgggttactggattctgtttgatggcgttgacggcgtcttcattaacggc
ggcaccctcgacggtcagggtgctgccttgtggaactgcaaggcttcccggaaggactgc
cccaatggcgctacgagtctagggtttatccattccaacaacgtcatggtatacgggcta
acctccgttaacagccagttgttccacgtcgttatcctcgcctgcaaaaacacgacactg
caagggttaaacattatggcccctagaaatagtattaacacagacggcgttcatgtccag
ttctcgtcaggtattaccgtcgtcgactctaatatcggcaccggagacgactgtgtatcg
atcggcccaggcagtactaatctatggattgagaacattgtgtgtggccccggccacgga
atcagcattggaagtttaggcagggattatgaagaaaaaggggtgcaaaatgtgacggtt
aaaatggttacctttataaatacacaaaatggtgcaaggataaaaacttggggcagacca
agcacaagttttgtgaaggatgtcctcttccaacatgctcttatgtacgatgtccaaaat
cccattattatcgaccagaattactgcccctacaacaaaagtagttgcccaggccagtat
tcgggtgttaaaattagtgatgtaacatatgaagacatccgaggaacatctgcaacgcaa
gtaggggtgagactcgactgtagcgcgacgaacccgtgccgcagcataaaactacaggac
gtcatgttgacgtatgaagacggaccagccgaagcgtcatgcgttaacgccgacggaaca
acttccggcgttattcaacctatggcttgtttctaa
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