Ipomoea nil (Japanese morning glory): 109190199
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Entry
109190199 CDS
T04663
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109190199
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ini01002
]
109190199
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109190199
03036 Chromosome and associated proteins [BR:
ini03036
]
109190199
Peptidases and inhibitors [BR:
ini01002
]
Metallo peptidases
Family M1
109190199
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109190199
Coactivators
SAGA/TFTC/STAGA complex
109190199
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109190199
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
109190199
NCBI-ProteinID:
XP_019196191
LinkDB
All DBs
Position
Un
AA seq
1586 aa
AA seq
DB search
MAKPRKGKSEEQKGENTEAVIRHQKLCLSIDMEKRRIYGFTEIEIAVPDNGIVELHADNL
VIESVTVDEEPAQFEVFPHYLHLDSGDRWCSVSSASSAADAAGSVYLSTLDRELVPNLLI
MCSKSSKLESEQQEEPLENGVKSSIEEKQEEPGTLENGVKSSAEEKQNVKKLCIDYWVEK
AETGIHFDGDVLHTDNQIRRARCWFPCMDDNLQRCCYDLEFTVASNLVAVSSGTLLYQVL
SKDDPSRKTYVYRLDVPVTAGWISLVVAPFEILPDPHIAQLSHICLPSNLSKLRNTIGFF
HNAFSHYEDYLAAPFPFGSYTQVFLSPEMAISSLSLGASMSIFSSQLLFDEKVIDQTIET
RIKLAYALARQWFGVYITSETPNDDWLLDGLAGFLTDTFIKRFLGNNEARYRRYKANCAV
CRADDSGATALSSSASSKDLYGTQCIGFYGKLRVWKSVAVLQMLEKQMGPEPFRKILQQI
VSKAQITTRTWRTLSTKEFRHLANKVGNLERPFLKEFFPRWVGSCGCPVLKMGFSYNKRK
NLIELAVIRGCTARLDASATTCNGNLDSENREGDVGWPGMMSIRLHELDGMYDHPILPMT
GEPWQLLEIQCHSRLAAKRFQKPKKGSKPDGSDENEAVTTVDVRSTSDSPLLWLRADPEM
EYLAEIHFSQPVQMWINQLERDKDVIAQVQAITILEALPHLSFSIVNSLNNILKDSKVFW
KVRIEAAFALANTASEETDWAGLLHLITFYKSRRFDSNIGLPKPNDFHDFQEYFVLEAIP
HAIATVRATDKKSPREAVEFVLQLLKYNDNSGNFYSDVYWLAALIQSIGELEFGQQSIVY
LSSLLKRLDRLLQFDRLMPSHNGILTISCIRSLTQIALKLSEFVPLDHVIELIEPFRTSK
AIWQVRVEASRSLLDLEFQCKGIDAALSLFIKYLNEESSLRGQVKLGVHAMRLCQIRNES
GYDHELNSDTLVALLRLLESPISFNNVFLRHYLFCILQVLAGRVPTLHGVPRDESMGHAK
TCNELKNIFAALVKQSNKPSEPPMDKFEIIHNGPFVLEVPGEADCSTLGPEPGKDIFTVI
PDTTPKEADGLSHELTKDSAKPPHSTVVAEVQKVDTILPVSNDCMDSMADLPQDDIIVAD
IPHSSISEVPKELDSVTDGCVPLRDIPQDYPPPPPPPPPPPPPPEKPILPETHEQRKPVV
SLLHEDLHVACSREASVPESHKRGRVVSNSLRDGSLNAEASREHETISAGHERKKPVFRI
KVKKSTTSSCAGDPENPTVDKSHDGLHDIDRGASSSVSVSVDAPQRNFFEGASGNNQNID
DVNSCHDVGSRVTASIGSVKVATDGEELMKELQCTAESSKVPPDDQIIRGRDVDMEGHKF
ASLQSLSCTKPDVNCTSLDTSNLHAHGKGKHKKRKRDEKREKEHKSKHDDPEYLERKRLK
KEKKRKEKEMAKLLDDGAKPKPSPKPSVELQKKRENVEGKVRSHKGGDATNSITDLGRRK
DEAEFRVGGAVKQSPSSLYTKNSDPGRKEAALQLRMGESSGAKLVSDRAAAADNTPSSAP
QASAPAPASTSHKLKIRIKNRTLGKS
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgaaagggaaagagcgaagagcaaaagggagagaacaccgaagctgta
attcgccatcagaagctctgcctttcaatcgacatggagaagcgtcgaatttacggtttc
accgagattgaaatagctgtgccggacaacgggattgtggaattgcacgcggataatttg
gtaattgaatctgtgacagtcgatgaggagcctgcgcaattcgaagtgtttccacattat
ttgcatttggatagtggggatagatggtgctctgtgtcatccgctagttctgctgctgat
gcagcggggtcggtttacttatctactctcgatagggagttggttccgaatttgctgatc
atgtgtagtaaatcttctaagctggagagcgaacagcaggaagagcctctggagaatggg
gttaaatcttcaattgaagaaaaacaagaagaaccagggactctggagaatggagttaaa
tcttcagctgaagaaaagcagaatgttaaaaagctgtgcattgactattgggtggagaag
gctgaaacaggaatccactttgatggtgatgttttacacactgataaccaaataaggcgt
gcacgctgttggtttccttgcatggatgacaatttgcagcgctgctgctatgatttggag
ttcacagtagccagtaatcttgttgcagttagctctgggactttactttatcaggtcttg
agcaaagatgatccttcgcgtaaaacatatgtatatagattagacgttcctgttacggct
ggatggatatccttggttgttgcaccatttgaaattcttcctgaccctcatattgctcaa
ctgtcccatatttgtttgccatctaacttgtcaaagctgcggaacactataggatttttt
cataatgctttcagccattatgaggattacctagctgcaccatttccttttggatcgtat
acacaagtctttttatctcctgagatggcaatatcttcattgagtttgggagcttcaatg
agcatcttcagctctcagttgctctttgatgagaaagtcattgatcagaccatagagaca
aggattaaacttgcttatgctcttgcaagacaatggtttggagtatatatcacctctgaa
acaccaaatgatgattggttgttggatggccttgctggatttttaaccgatacatttatt
aagagattcctgggaaataatgaagcacgatatcggcggtacaaggctaactgtgctgtg
tgccgagcagatgatagtggtgctaccgccttaagctcctctgcttcttccaaggatcta
tatgggacccaatgcattggtttttatggaaaacttagagtctggaagtctgtggcagtt
cttcagatgttggaaaagcagatgggtcctgagcccttccgtaagattctgcaacaaatt
gtttcaaaagctcaaattacaacaaggacttggaggacccttagtactaaagagtttagg
caccttgcaaataaagttggaaatcttgagcgtccttttcttaaagagttttttcctcga
tgggttggatcatgtggttgtccagttttaaagatgggcttctcctacaacaagagaaag
aacttgattgaattagcagtaataaggggatgcacagccagactagatgcaagtgcaacc
acatgcaatggtaaccttgactctgaaaatcgtgaaggtgatgttggatggcctggcatg
atgagcatacgccttcatgagcttgatggcatgtatgaccatcctattcttcctatgact
ggagaaccttggcagcttcttgaaatacaatgtcattccaggcttgctgccaaacgcttt
caaaaaccgaaaaagggttcaaaacctgatggttctgatgaaaatgaagctgtgacaact
gtagacgtgcgctcaacttctgattcacccttgttgtggctccgggcagatccagaaatg
gagtatctagctgaaattcattttagtcaaccagttcagatgtggataaatcagctggaa
agggacaaagatgttattgcacaggtgcaagcaatcacaatacttgaagcattgccacat
ctttcattttccattgttaattccctcaacaatatcctcaaggactctaaggtgttttgg
aaagtccgaattgaggcagcatttgccttagccaacactgcatctgaggaaactgattgg
gctggcttgctccatttgatcacattctataaaagtcgaagatttgattctaatatagga
ctacccaagccaaatgactttcacgattttcaggagtattttgtacttgaggctattccg
catgcaattgcaactgtgcgagcaacagacaagaaaagccctagagaagctgttgaattt
gttttacaacttttaaagtataatgataacagtggaaacttctattctgatgtttactgg
ctggctgcactcatccagtccattggtgaacttgaatttggacaacagagcatagtctat
ttatcatcccttctcaagcgacttgatcgacttttacagtttgataggttaatgccaagc
cacaatgggatcctgactatcagttgtatccgatcattgacccaaattgctctgaaattg
tcagaatttgtacctcttgatcatgtcattgagctaattgaaccttttcgaacttccaag
gcaatatggcaagttcgagttgaagcaagccgctctctcctggatcttgagtttcaatgc
aaaggcattgatgctgcattgtcattgttcattaaatacttgaatgaagaatcatcttta
agaggtcaggtaaagcttggtgtgcatgcaatgaggttatgtcagataagaaatgaatct
ggctatgaccatgaattgaatagtgacactcttgttgctttgcttcgtcttcttgagagc
cctatctcattcaataatgtgtttctccgtcattatctattctgcattttacaagtcctt
gctggaagggttccaacacttcatggagtgccaagagatgagagtatggggcatgccaag
acttgcaatgaactgaagaatatttttgctgctcttgtcaagcaatctaataagccatca
gagcctcctatggacaagtttgagattatacataatggtccatttgttttagaagttcct
ggggaagcagattgttctacacttggtcctgaacctgggaaagatatttttactgtgatt
ccagatactactccaaaagaagcagatggtctgagccatgaactaacaaaagatagtgcc
aaacctcctcatagcacagttgttgcagaagttcagaaagtagacactattcttcccgtc
agtaatgattgcatggactcgatggctgaccttccgcaagatgatatcattgtggcagat
atacctcatagttcaatttctgaagtcccaaaggagttggattctgttaccgatggttgt
gtaccactgcgtgacattccacaggattatcctcctcctcctcctccaccaccaccacca
ccaccaccacccgaaaaacccattcttcctgaaacccatgaacaacgaaagcctgttgtg
agcctcttgcatgaggatttacatgttgcgtgctctagggaagcaagtgttcctgaaagt
cacaaacgtggtagggtagtttctaacagcttacgagatggctcactaaatgctgaagct
tctagagaacatgaaaccatttctgctggtcatgaaagaaaaaaacctgtttttaggatt
aaagttaaaaagtctaccacatctagttgtgctggtgatcctgagaatcccactgtggat
aaatctcatgatggtcttcatgacatcgatcgtggggcaagcagttccgtatctgtatct
gttgatgcaccacaaagaaactttttcgagggtgcaagtggtaataaccagaacattgat
gatgtaaattcttgtcatgatgttgggtctagagtaactgccagcattggcagtgtcaaa
gttgccaccgacggtgaagaactaatgaaggaactacagtgtactgctgaatcaagtaaa
gtgcctcctgatgatcaaatcatcagaggtagagatgtggatatggagggacataaattt
gcaagtttacagtctctctcttgcactaagcctgatgttaattgcacttcacttgataca
agtaacctccacgctcatggtaaaggcaagcacaagaagagaaagagggatgagaagaga
gaaaaagaacacaaaagtaagcatgacgatcctgagtacttggagcggaaaaggttaaag
aaggagaagaagcggaaagagaaggagatggcaaagctgttggatgatggggcaaagcct
aagccttcgcctaagccttcagtggaattacaaaagaagagagaaaacgttgaaggtaaa
gtgcgctcacataaaggtggtgatgccactaatagtataacagatttagggcgtagaaaa
gacgaagccgagtttagagttggtggggctgtaaagcagtcaccatcaagcttgtacacg
aagaacagcgatcccgggaggaaagaggcagccttacaactaagaatgggtgagtcaagc
ggagcaaagttggtaagtgatcgagcagcagcagcagataatacgccttcgagtgcaccc
caagctagtgcaccagccccggcaagcacttcacataaacttaagattagaattaaaaat
cgaacacttggaaaatcctga
DBGET
integrated database retrieval system
