KEGG   Ipomoea nil (Japanese morning glory): 109190228
Entry
109190228         CDS       T04663                                 
Name
(RefSeq) DNA repair protein RAD51 homolog
  KO
K04482  DNA repair protein RAD51
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03440  Homologous recombination
ini03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    109190228
   03460 Fanconi anemia pathway
    109190228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ini04131]
    109190228
   04121 Ubiquitin system [BR:ini04121]
    109190228
   03400 DNA repair and recombination proteins [BR:ini03400]
    109190228
Membrane trafficking [BR:ini04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    109190228
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    109190228
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     109190228
    RecA family proteins
     109190228
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109190228
SSDB
Motif
Pfam: Rad51 RecA AAA_25 HHH_5 ATPase DnaB_C AAA_22 AF1548-like_C
Other DBs
NCBI-GeneID: 109190228
NCBI-ProteinID: XP_019196231
LinkDB
Position
Un
AA seq 344 aa
MEQQHRNQQKSVQERQQDEVEEIQHGPFPIEQLQESGISAIDVKKLKDAGLCTVESVVYS
PRKDLLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKVLEG
GIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA
DRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGR
GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA
STTRLALRKGRGEERVCKVVSSPCLAEAEARFQISPEGVTDVKD
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggagcagcagcacagaaaccagcagaaaagtgtgcaagaacggcagcaagatgaggtc
gaggaaattcaacacggccctttcccgattgagcaactccaggaatctggaatctctgcc
attgacgtaaagaaacttaaggatgcgggtctatgtactgtagaatcagttgtgtactct
cctagaaaagaccttctgcaaataaaagggatcagtgaagctaaagttgacaaaatcata
gaggcagcttcaaaattggtgcctctgggttttactagtgccagccaactccatgcacag
aggcttgaaatcattcaaataacatctggatcaaaagagcttgacaaagtcttggaaggg
ggaattgaaacgggatctatcactgaaatttatggcgaattccgctctgggaagactcag
ctttgtcatacattatgtgttacttgccaacttcccttagatcaagggggcggtgaaggg
aaggcaatgtatattgatgctgagggcactttcagaccacaaagactcttgcagattgca
gacaggtttgggttgaatggagcagatgttctagaaaatgtggcatatgctcgagcttat
aacactgatcatcagtcaaggcttttgctcgaggcagcctcaatgatggtagaaaccagg
tttgctcttatgattgtggatagtgctaccgcactttataggactgatttttctggacga
ggggagttgtctgccaggcaaatgcatctggcaaagttcctaagaagccttcagaaatta
gcggacgagtttggtgttgcagttgtaattactaaccaagtggttgcccaagtcgacggt
tctgccatttttgctggacctcagatcaaacccataggcggcaacattatggcgcacgct
tctacaacaaggctggctcttcgaaagggaagaggagaagagcgcgtttgtaaagtagta
agctctccatgtttagctgaagctgaagcaaggtttcaaatttctcctgaaggtgtaact
gatgtgaaggactga

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