Ipomoea nil (Japanese morning glory): 109190416
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Entry
109190416 CDS
T04663
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109190416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109190416
03036 Chromosome and associated proteins [BR:
ini03036
]
109190416
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109190416
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109190416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
TerL_nuclease
Motif
Other DBs
NCBI-GeneID:
109190416
NCBI-ProteinID:
XP_019196435
LinkDB
All DBs
Position
Un
AA seq
1078 aa
AA seq
DB search
MEVDMETSPSSFDPEDLSIRQRFRRYGKRHSPSSLSPHREKSADRLAEVRSNSALFLESI
KQEFESLHSDHVTTPLKMQNDTKWRSSLESHVISGTDFGVDATRQGGSISLKTCKEEHDA
VVDDEGTTFSLFASLLDSALKGLMTIPELVLHFENSCRNVSESIRFGFSGRHRIVEDKLM
KQKARFLLDEAASWSLLWYLYGKGNEELPKDLMMFPTTSHLEACQFVNGDLTAQLCLRIV
QWLEGLASKALDFDKEVRGSHVGTYLPNSGVWQQTQRFIKKGSLNAKTVSHLDFDAPTRE
QAQLLPDDKKQDESLLEDVWILIRAGRLEEAFNLCRSAGQQWRAATLSPFGRFDQSPSID
ALVKNGKTRTLQSIELETGIGHQRRLWKWACYCASEQIAEQDGGKYETAVYAAQCSNLKR
ILPICTDWESACWAMAKSWLDVLVDIELTRLQPGGRNQFKSFEEALDQSLEQENGASQPI
MGSDGWPLQVVNQQPRHITALLQKLHSSDTVHEVVAQSCKDQQRQIEMNLMLGDIPHLLD
LIWSWISPAEYDETVFRPHGDPQMMRFGAHLVLVIRYLLADQINDVFREKIMTVGDLIIH
IYAMFLFTNHHEELVGTYASQLAAHRCINLFLHMMELRLNSSVHVRYKIFLSAIEYLPFT
PEDDSKGSFEEIIERVLSRSREIRDEKYDSTNNVAEQHRLQSLQKAMVVQWLCFTPPSTI
NNAKDVSAKLLLRALRHSNVLFREFALISMWRVPAMPVGAHTLLSLLAEPLKHPTEGVST
DDYDASANLREFQDWNVYYSCDATYRNWLKIELENTEISPLELSDEEKNRAVTAARETLQ
TSLLLLIREGNPWLVPTQDQIIYETDEPIFLELHAVAMLCLSSGECMTPDATLCATLMSA
LYSSVSEEQVLNRQLMVNVSISSKDNYCIEVVLRCLAVEGDGLGSPELHDGGILATVLAA
GFKGEMLRFQAGVTMEISRLDAWYSRNDGTIESPATYVVRGLCRRCCIPELILRCMQVSA
MLMESGKPPQNHDELIDLVTNPETGYLNLFSQHQLQEFLLFLREYEIYKMALEESSNF
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatatggagacttcccccagcagctttgaccccgaagatctcagtatcaga
cagcgctttcgtcgatacggcaaacgacattctccttctagcctatctccgcaccgagaa
aaatcagctgataggttagcagaggttaggtcaaattcagctctttttctggaaagtatc
aagcaagaatttgaaagccttcatagtgatcatgtaacaacacctctaaagatgcaaaat
gacacaaaatggagatcttctctcgagagccatgtaatttccgggacagattttggtgtc
gatgccactcgccaaggtggaagcatttcccttaaaacatgcaaggaggagcatgatgca
gtggtagatgatgagggcacaaccttttctttatttgcttcgctattggattcagctctt
aaagggttaatgactatacctgaattggtattacattttgagaattcttgccgcaatgtt
tcagagtcaattagatttgggtttagtggaaggcacagaattgtggaggacaaattgatg
aagcagaaagcaagattcttgcttgatgaggctgcatcatggtctctcctgtggtacctc
tatggaaaaggaaatgaggaactccccaaggatctaatgatgttcccaacaacttcacat
ttggaggcttgccagtttgttaatggagatcttactgcacagctctgccttcggattgtt
cagtggcttgaagggttagcctcaaaagcccttgattttgacaaggaggtgcggggttct
catgtaggtacatatctcccaaattctggagtttggcagcagactcaacgcttcataaag
aaaggttctttgaatgcaaagacagttagtcatttggattttgatgccccaacacgagaa
caggctcaactattacccgatgacaagaagcaagatgaatcacttcttgaagacgtttgg
atcttgataagggctggcagactggaagaagcattcaacctctgtcgttctgctggacag
caatggagggcagctactttgtctccatttggacggtttgaccagagtccctccattgac
gccctggtaaaaaatggaaagactaggactctgcaatccattgaactggaaactggcatt
ggtcaccagcgacgcctttggaagtgggcttgttattgtgcatcagagcaaattgcagag
caagatggaggtaaatatgaaacagcagtgtatgcagcacaatgcagtaacttaaagcgc
attcttccaatttgtacagattgggagtctgcctgttgggcaatggccaaatcatggctt
gatgttctggttgatattgaattgacacgcctgcaaccgggtggaagaaatcagttcaaa
agttttgaagaagcacttgaccaaagtctggaacaggaaaatggtgcttctcagccaata
atgggttcagatggttggccacttcaagttgtgaaccagcaacctaggcacattactgcg
ttgcttcagaaactacattccagtgacactgtgcatgaagttgttgcacagtcatgcaaa
gatcagcagagacaaattgagatgaatcttatgctaggtgacattcctcatctgctagat
cttatctggtcgtggatatcgccagctgaatatgatgaaactgtgttcaggcctcatggt
gatccacagatgatgcgttttggcgcacatctagtgcttgtaattcggtatttacttgct
gatcagattaacgatgtcttcagagagaagataatgacagttggagatcttattattcac
atatatgctatgtttctttttacgaatcatcatgaagagttggttggcacatatgcatct
caacttgctgctcatcgttgcatcaatctgtttttgcatatgatggagttacgtctgaac
agcagtgtccatgtcagatataagatctttctttctgccattgagtacttgccatttact
ccggaagatgattcaaaaggcagttttgaagaaatcattgagagggttttatcaaggtcc
cgagaaatcagagatgaaaaatatgatagcacaaacaatgttgcagagcaacaccggctg
cagagccttcaaaaagctatggttgttcagtggctttgttttacacccccctctacaatc
aacaatgcaaaagatgttagtgccaaactacttcttcgggcattgaggcatagcaatgta
cttttccgggagtttgctcttatttcaatgtggagggttccagcaatgccagttggagca
cacacattacttagtttacttgctgagcctttgaaacatccaactgaaggtgtttccact
gacgattatgatgcttccgcgaatctgagagagttccaggattggaatgtatactactca
tgtgatgctacataccggaactggctaaaaattgaactagagaatacagaaatttctcca
cttgaattatctgatgaggaaaagaatagagcagtaacagcagctagagaaacactgcag
acttctttgttactgcttataagagaaggaaatccttggctggttccaactcaagatcaa
attatatatgaaacagatgaaccaatatttctggaattgcatgctgttgcaatgctgtgt
ctatcttcaggtgaatgtatgactccagatgccaccttgtgtgcaacattgatgagtgca
ctctattcttcagtaagcgaggaacaagtgctaaaccgtcagttgatggtgaatgtctcc
atttcatctaaggacaactactgcattgaagttgttttacgctgcttggcggtagagggt
gatgggcttggatctccagagctccatgatggtggtattcttgctacagtgcttgctgct
ggcttcaaaggagagatgcttcgttttcaagctggagtaacaatggaaatctctagatta
gatgcatggtattccagaaatgatggcactatcgaaagccctgctacatatgtagtgagg
ggtctctgtcgcaggtgttgcattcctgaattaattctccggtgtatgcaggtttctgcc
atgctgatggagtctggcaagccacctcaaaaccatgatgagctaattgacctggtcact
aatcccgaaactggatatcttaatctgtttagtcagcatcagttgcaggaatttttatta
tttttaagggaatatgaaatttacaagatggcgcttgaggagtccagtaatttttga
DBGET
integrated database retrieval system
