Ipomoea nil (Japanese morning glory): 109190418
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Entry
109190418 CDS
T04663
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109190418
03041 Spliceosome [BR:
ini03041
]
109190418
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109190418
Spliceosome [BR:
ini03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109190418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
109190418
NCBI-ProteinID:
XP_019196437
LinkDB
All DBs
Position
Un
AA seq
422 aa
AA seq
DB search
MQHQRLKQQQQALMQQALLQQQSLYHPGLLAAPPIEPIPSGNLPPGFDPSTCRSVYVGNI
HPQVTEPLLQEVFASTGPIEGCKLIRKDKSSYGFIHYYDRRSAGLAIMSLNGRHLFGQPI
KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFACFSTFPSCSDARIMWDQKTGRSRG
FGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATKGANANDDKQSSDSKSVVELTNGSS
EDGKEAANSEAPENNPQFTTVYVGNLAPEVTQVDLHRHFHALGAGVIEEVRVQRDKGFGF
VRYSTHAEAALAIQMGNTQSILCGKQIKCSWGNKPTPPGTASNPLPPPAPAPLHGLSATD
LLAYERQLAMSKMGGFNALMHPQGQHTLKQASMGMGAAGASQAIYDGGFQSVAAAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcagcaacaacaagccttgatgcaacaagctctcctgcaa
caacagtctctctatcacccgggcctcttagctgctcctccgattgagccaataccaagt
ggaaatttgcctcctgggtttgatccaagcacatgccgcagtgtgtatgttgggaatatt
cacccacaggtgactgaacctcttctgcaggaagtttttgctagcactggtcctattgaa
ggatgcaagcttatacgaaaggataagtcatcctacggtttcattcattactatgaccgt
agatctgctggccttgctataatgtcgctgaatggcaggcatctgtttggccagcctatt
aaagtgaactgggcatatgctagtggtcagagggaagatacttctagccatttcaatata
tttgtaggtgacctcagccctgaagttactgatgccatgttatttgcttgcttctccaca
ttccctagctgttctgatgcaagaatcatgtgggatcagaagactgggcgctctaggggt
tttggatttgtttcttttcgaaaccaacaggatgctcaaagtgccattaatgatataacc
ggaaaatggcttggcagtagacagatacgatgtaactgggcaactaaaggcgccaatgcc
aatgatgacaaacaaagttctgactcaaaaagtgttgtggaactaacaaatggttcatca
gaagatggtaaagaggctgcaaatagtgaagctcctgagaataacccacaattcaccact
gtgtatgtgggcaatcttgctcccgaggtaactcaggttgaccttcatcgccacttccat
gcccttggtgcgggagtcattgaggaagttcgtgtacagcgtgataaaggtttcggtttc
gtaagatacagcacccatgctgaggctgctttggctattcagatgggaaacacacagtca
attctttgcggaaaacaaattaagtgctcatggggtaacaagccaacgccacccggaaca
gcttcaaaccctctcccaccaccagcgccagcgcccttgcatggcctatcagccactgat
cttctggcttacgagcggcagctagcaatgagcaagatgggagggttcaacgccctcatg
caccctcagggtcagcacactctaaagcaggcgtcgatgggtatgggtgctgccggagcc
agccaagccatttacgacggcggttttcagagtgtggctgctgcccagcaactcatgtac
tatcagtga
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