Ipomoea nil (Japanese morning glory): 109190424
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Entry
109190424 CDS
T04663
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109190424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109190424
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109190424
mRNA degradation factors
5'-3' decay
Lsm complex
109190424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
109190424
NCBI-ProteinID:
XP_019196450
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All DBs
Position
Un
AA seq
128 aa
AA seq
DB search
MSWASPEDIHLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYIIRGENVVLIGELDLDKEELPPHMTRVSEAEIKRAQKVEREATDLKGTMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccagtccggaagatatccacctctccacttctcttgccagctatcttgac
aagaaacttcttgtgttgctgcgagatggtcggaagcttttgggcacacttagatctttt
gaccaatttgcaaatgctgttcttgaaggtgcatgtgagcgggttattgttggtgatctc
tattgtgacattccgctaggtctatacataattcgtggagagaatgttgtgctgatcggc
gagctggatttggataaggaggaacttccacctcatatgactcgcgtttcagaagcagag
ataaaaagggcacaaaaagtagaaagagaggctaccgatcttaaaggaactatgagaaag
aggatggagttcctcgatatggactga
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