Ipomoea nil (Japanese morning glory): 109190548
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Entry
109190548 CDS
T04663
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109190548
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
90S particles
Other 90S particles
109190548
Pre-60S particles
Other pre-60S particles
109190548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
DUF7097
Hemerythrin
HalD
Motif
Other DBs
NCBI-GeneID:
109190548
NCBI-ProteinID:
XP_019196593
LinkDB
All DBs
Position
Un
AA seq
1293 aa
AA seq
DB search
MCSENTSSSTMEGSDMEFLPEQNLDSEADDFCAAVLSQFSDSANESHVHICTAIGAMSQE
LKDQNLPLTPITYFGATCSSLQRVSTAEAEDPQPHIVDALSTILSLVIDKISRAALLKKF
DYTSNLLARILRQKTTGVQGIVSCLKGVSYLLLVREKANWADVAELYGFLVGFMADDRPK
VRKQSHICLREVLQKFQMSPVLTALLAPASEAIGNVFERSLLLAGGSNASAPEGPKGAQE
VLYILDALKICLPFMSVKSSVSILKYFKSLLELRQPLVTRRITDAINALCIHPTGEVSPE
VLLDLLCSLATSISAHQSSADSMTFTSRLLDVGMKRIYSLNRQICVVKLPVVFSALSDVL
VSEHEEALVAAKEAFKNLINACIDENLIKQGVDQVMNSNEGTRKSAPTIIEKVCATIESL
LDYQYAAVWDISFQIVSTMFDKLGQYSSYFLKGALENLAEIQKLPDEDFPFRKQLHECVG
SAVGAMGPEAFLSILPLNLDSRDLSEANLWLFPILKHYIVGAHLSFFTKTIMSIIAAMKQ
RSAVFEQEGKIISARTIDGIVYSLWSLLPSFCNYPLDTADSFKALEKVLNKALREEPDVH
GIICSGLHILIEQNKSIVEGKEDLSNSGMSIHKERAIARYNSQVVADNLNAVRVSARELL
SILSGAFLKSSKDTIGPLQTVIGELASISDKEVVTRFFKSTMQKLLKVTQEAGKTGSRDN
NAMQVDNSSGEESLSSVRAQLFDLAVSLLPGLDSKEIDLLFIAIEPALKDAEGLVQKKAY
KVLSIMLQKSDEFTSRRLDELLNLMVEALPSCHFSAKRHRLDCLYFLIVHISKDNSVQRR
SDLVASFLTEILLALKEINKRTRNRAYDILVQIGHACADEERGGKKEHLEQLFNMVAGGL
AGETPHMISAAMKGLARLAYEFTDLVAASYNVLPSAFLLLRRKNKEIIKANLGLLKVLVA
KSQAEGLQAHLRGMVEGLLNWQDSTKNHFKAKIKLLLEMLVKKCGMDAVKEVMPEEHMKL
LTNIRKIKERRDKKLNDNSSEESKSRMSKATTSRLSRWNHTKVFSDFGDDETEDSEAESM
DMKTRNGRQSRADAHSLRSKKTRKSSRSLQEDLFDQLDDEPLDLLDQQKTRLALRSSGNN
KRKAESDDEMEIDAEGHLIIREEDGKPKRKKSLDSEADVRSETGSRSSMNSRKTQTQTQK
RRKTSDAGWAYTGNEYSSKKASGDVKRKGKLEPYAYWPLDRKMMSRRPEQRAAARKGMSS
VVKMTKKLEGKSVANALKMKGAKGSKKRGTSKS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcagagaatactagctcctcaacaatggagggctctgatatggaatttctaccg
gagcaaaacctagactccgaagccgatgacttctgcgctgccgtgttatcccaattcagc
gattccgccaacgagtctcacgtccacatatgcaccgccatcggcgcaatgtcgcaggag
ctaaaagaccagaacttgccactcacccccataacctacttcggcgctacttgctcatcc
cttcagcgcgtctccaccgccgaagccgaggacccccagcctcacatcgttgacgctctc
tccaccattctctcactcgtcattgataaaatcagcagagctgcgctgctaaagaaattc
gattatacttcgaatctccttgcccggattctccggcagaaaacgactggtgttcagggg
attgtctcgtgtttgaagggcgtttcgtatcttttgcttgttagagaaaaggcgaactgg
gcggatgtagctgagctctatggttttcttgttggttttatggcggatgatcgaccaaaa
gtgaggaaacagtctcacatttgtcttcgagaggtcctacaaaaatttcagatgtcacct
gtgctcacagctttattggcacctgcaagtgaagctattggtaatgtctttgaaaggtct
ctcctacttgctggaggatcaaatgcgagtgctccggagggcccgaaaggagctcaggaa
gttctgtacattcttgatgcactcaaaatttgtctcccatttatgtccgtgaagtcgtca
gtgagcattttgaaatacttcaaatctctcttggaattgcgtcaacctcttgttaccagg
cgtataacagatgccattaatgccctctgcatccacccaactggagaagtttccccggaa
gtgcttcttgatctgttatgctcattagccacatcaatttctgcacatcagtcatcagct
gatagcatgacatttacttctcgcttgctagatgttgggatgaaaagaatatattcccta
aatagacaaatttgtgtggttaagctcccagtggtattcagcgcacttagtgatgttttg
gtttctgaacatgaggaagcattggtagctgcaaaggaagctttcaagaacttaataaat
gcatgcattgatgaaaacttgatcaaacaaggtgtggatcaggttatgaattctaatgag
ggaacaaggaaatctgccccaacaattattgaaaaagtatgcgcaacaattgaaagcttg
cttgattatcaatatgcggcagtctgggatatttcgtttcaaattgtttcaacaatgttt
gacaaactaggtcaatattcttcttacttcttgaaaggagcacttgagaatttggccgag
atacaaaagttacctgatgaagattttccatttcgtaaacagctacatgaatgcgtggga
tcggctgttggtgcaatgggacctgaagcttttttaagtattcttcctctgaatttggac
tctcgggatttatccgaggccaatctgtggctgtttccgatcctgaaacattacattgtt
ggtgctcatttaagtttctttaccaagacaattatgtcaattattgcagctatgaagcag
cgatctgcagtgtttgagcaagaaggaaagatcatctctgcgaggactattgatggcatc
gtatactctttatggtcattgttaccctcattttgcaactatcctttagacactgctgat
agcttcaaggccttggagaaggtgctaaataaagctttacgtgaagagcctgatgttcat
ggtataatatgctccggtttgcatattctcattgaacagaacaagagcattgtagaagga
aaagaggatctgtctaacagcgggatgagcattcacaaggagcgagcaattgctcgttac
aactcacaagttgtagctgataatttgaatgcagtaagggtctctgctcgtgaattatta
tctattctttctggagccttcttgaaatcttcgaaagacacgattggacctctgcagacg
gttattggtgagctggcttccatttcggataaagaggtagtcacaaggttcttcaagagt
actatgcaaaaacttttgaaggtgacacaagaggctggtaaaacaggctcaagagataac
aatgcaatgcaagtggataactcttctggtgaagaatcattgtcgtcagtgagggctcag
ctatttgatctggcagtttcacttttgcctggcttagactccaaggaaattgatctcttg
ttcatcgcaatagaacctgcattgaaggatgctgaaggattggttcagaaaaaggcatac
aaagttctttcaatcatgctccaaaaatctgacgagtttacttcaaggaggcttgatgag
ttgcttaatttgatggttgaagcactgccatcatgccatttttctgccaagcgtcataga
cttgactgcctgtatttcttgattgtccatatttccaaggataactcagtacagaggagg
agtgaccttgttgcttcgtttttaaccgaaattctacttgccttaaaagagattaacaaa
aggacgaggaacagggcatatgatattctggtccagattggccatgcttgtgccgatgaa
gagagaggtggcaaaaaggagcacttagagcagttgtttaacatggtcgctggtggcctt
gctggggagacccctcacatgattagtgcggcaatgaaaggtttagctcggttggcctat
gaattcactgatcttgtcgctgcttcgtacaatgtccttccatctgcatttctccttctt
aggagaaagaacaaagaaataattaaggctaatttaggcctcttgaaggtattggtggcc
aaatcacaagcagaaggattgcaggctcatttaagaggcatggtggaaggcctcctaaac
tggcaagatagtactaagaaccattttaaagctaagattaagctgctacttgaaatgctc
gtcaagaagtgtggcatggatgctgtaaaggaagtgatgcccgaggagcacatgaagctc
ctcactaacataagaaagattaaggagaggagagataagaagctcaatgacaactcttcg
gaggaaagtaaatctcgtatgtcaaaagcaacaacatccaggcttagtcgatggaatcat
acaaaagttttttctgattttggtgatgatgaaactgaggatagtgaagctgagtctatg
gatatgaagaccagaaatggtcgacaaagtagggccgatgcacattcattacggtctaag
aaaacacgtaaatcatcgaggagcttgcaagaggatttgtttgatcaattagacgatgag
ccactcgacttacttgaccaacagaagacgaggttagctcttagatcctctggaaataac
aagcgcaaggcagaatctgacgatgagatggagatagatgccgaggggcatcttatcatt
cgtgaggaagacgggaagccaaaaagaaagaagtcactcgacagcgaggcagatgtaaga
agtgaaactggcagtcgctcgtcaatgaactcaagaaaaacccaaacccaaacccagaaa
cgcaggaaaacatcagatgctggatgggcttacacaggaaacgaatactcaagcaagaaa
gcaagtggcgacgtgaagcgcaagggcaaactcgagccatatgcctactggccccttgac
cgcaagatgatgagccgcaggccggaacaacgcgctgctgcaagaaaaggcatgtcgagt
gtggtgaagatgacgaagaagttggaggggaagagtgttgctaacgcccttaaaatgaaa
ggagcaaaagggagcaagaagaggggcacaagcaaaagttag
DBGET
integrated database retrieval system
