Ipomoea nil (Japanese morning glory): 109190618
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Entry
109190618 CDS
T04663
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
ini03015
mRNA surveillance pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109190618
09122 Translation
03013 Nucleocytoplasmic transport
109190618
03015 mRNA surveillance pathway
109190618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109190618
03041 Spliceosome [BR:
ini03041
]
109190618
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
109190618
Spliceosome [BR:
ini03041
]
Common components
Common spliceosomal components
Cap binding complex
109190618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
SesA
Tropomyosin
ATG16
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
109190618
NCBI-ProteinID:
XP_019196692
LinkDB
All DBs
Position
Un
AA seq
858 aa
AA seq
DB search
MSGWRSLLLRIGDKCPEYAGNPDFKDQIETCFGSVRRELEHSGDDILPFLLQCAEQLPHK
IPLYGTLVGLLNLENEEFVRKLVESTQSNLQDALDSGNCNSIRILLRFLTVLMCSKVIQS
SSLVVVFETLLSSAATTVDEEKGNPAWQARADFYITCILSCLPWGGAELVEQVPEEIERV
MVGIEAYLSIRRHVSDSGFSVFEVIDDVDNGQNEKDFLEDLWGRIQDLSNREWKVDSVPR
PHLSFEAQLVAGKSLDFGPISCPEQPEILSDSTPGRQKHEADLKYPQRIRRLNIFPASKF
EDIQPIDRFVVEEYLLDVLLFLNGCRKECASYMVGLPVPFRYEYLMAETIFSQLLLLPQP
PFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFDRIADLDMECRTRLILWFSHHLSNFQ
FIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSIENAPTLEELLPPKGGP
SFKYGADDGTDQADHALSVELSGMVKGRQTAREIISWMDNNVLPVHSLEITRTVVLQTLL
DIGSKSFTHLITVLERYGQVIAKICTDEDQQVTLISEISSYWKNNGQMTSIAIDRMMGYR
LISNLAIVRWVFSSANVDQFHTSDRPWEVLRNAVSKTYNRICDLRKDISTLKRSLTLVEE
TVSKTQSELDSAESKLTLLDGEPVVGENPAKMRRLKANAEKAKEEEVSICESLEAKEALL
ARALDENEALFLSLYRNFSTVLAEPLHEVFADGTLRSSGQADEMTIDLEDSSAMEVDKDN
EEPKKSNPQNGGKSEYNLGEKEQWCLSTLGYLKAFTRQYSSEIWAHVGKLDATVLTEDVH
PLFRKAIYCGLRRPMNDF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttggcggagcttgctcttacggatcggcgacaagtgcccggagtacgccgga
aatccagacttcaaagaccaaattgagacatgtttcggctcggttcgccgagaattagag
cattctggggatgatattctgccgtttcttctccagtgtgctgagcaattgcctcacaag
attccactctatggaactttggttggtttgctgaatttggagaatgaagaatttgtcagg
aaattagtggagagcactcaaagtaacctgcaggatgccttggattctggaaattgcaat
tcaatccgaattttgttgaggttcctgactgtgttgatgtgcagcaaagtaatccaatca
agttctttagtggttgtttttgaaacattattgtcatcagcagcaactacagtggatgag
gagaaaggaaatccggcttggcaagcacgtgctgacttttatataacctgtattttatca
tgtcttccatggggtggggctgagcttgttgagcaagttcctgaggagattgaaagagtc
atggttggcattgaagcctacttaagtatccgaaggcatgtttcagattcagggttttct
gtctttgaggttattgatgatgttgacaatggtcaaaatgaaaaggatttcttggaggat
ctatggggtcgaattcaagacctttccaatcgagaatggaaagttgatagtgttcccaga
ccacatctttcttttgaggcgcagcttgttgctgggaagtcccttgattttggtcccata
agctgtcccgagcaacctgaaatactctctgacagtactcctggtagacaaaagcatgaa
gctgatttgaaatatccccagaggatacgacggcttaatatatttccagcaagcaagttt
gaggatattcagccaatagatcgctttgttgtagaagagtatttgttggatgtgctctta
ttcctgaatggctgtcggaaggaatgtgcttcatacatggttggactgcccgtgcctttc
cgatatgaatatcttatggcagagacaatattttctcagctgcttttgttacctcagcct
ccatttaaaccaatatattacacattggtgatcatcgacttatgtaaggcacttccaggg
gcttttcctgctgttgttgcgggtgcagtacgtgctctttttgatagaatagcagactta
gatatggagtgcagaacacgtctcatcctatggttctcacatcatttatcaaactttcaa
tttatatggccgtgggaagaatgggcttatgtgttagacctcccgaaatgggctcctcaa
cgtgtctttgttcaagaggttttggaaagggaagtccgtctatcgtattgggacaaaatt
aagcagagcatagagaatgcacctactctagaggagttgcttcctccaaaaggtgggcca
agctttaaatacggtgcagatgatggtacagatcaagcagaccatgctctgtctgtggag
ctcagtggtatggttaaaggaaggcaaactgctcgagaaattatatcttggatggacaat
aacgtacttccagttcacagtttggaaattactcgcacagttgttcttcaaacccttctt
gacattggatcaaaaagctttactcatctgattactgtcttggagagatatggccaagtc
attgctaaaatctgtactgatgaggaccaacaagttactctcatatctgaaataagttct
tactggaagaataatggtcagatgacatcaattgccattgatcgaatgatgggttaccgg
cttatatctaacctggccattgtgagatgggttttctcttcagcaaatgtggatcaattt
catacttctgaccgcccctgggaggttctgagaaatgctgtcagtaagacgtacaatcgt
atttgtgatttaaggaaagatatttcaaccctcaagagaagtcttacgttggttgaagaa
actgtatctaaaacccagtcggaattggattcagccgagtctaagctcactctcttggat
ggtgaacctgttgttggcgaaaaccctgccaaaatgagacggctaaaagctaatgctgaa
aaagcaaaagaggaggaggtatctatttgcgagtctctagaagcaaaagaagctcttcta
gctcgagcacttgatgaaaatgaggcactgttcctttccttgtacagaaacttttcgact
gtcttggcagaaccacttcatgaagtgtttgcagatggaaccttgcgatcgtctggtcag
gcagatgaaatgaccattgaccttgaagattcttctgcaatggaagtggacaaagataat
gaagaaccaaagaaaagcaatcctcaaaatggaggcaagagtgagtataatctaggcgaa
aaagagcaatggtgtttgtcaactctgggttatctcaaggcatttactaggcaatactct
tctgagatatgggcgcacgtagggaagttggacgccacagtactgacagaagacgttcac
cctctcttccggaaagctatatattgcggcctgcgaagacctatgaatgatttttaa
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