Ipomoea nil (Japanese morning glory): 109190751
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Entry
109190751 CDS
T04663
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109190751
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ini01009
]
109190751
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109190751
03036 Chromosome and associated proteins [BR:
ini03036
]
109190751
Protein phosphatases and associated proteins [BR:
ini01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109190751
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109190751
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109190751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ComGF
DUF4213
Ribosomal_S3Ae
Motif
Other DBs
NCBI-GeneID:
109190751
NCBI-ProteinID:
XP_019196878
LinkDB
All DBs
Position
Un
AA seq
510 aa
AA seq
DB search
MNNGGDGSSGGGGGGGLTAPPLPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLA
TGDRGGRVVLFERTDTKKHVGNQRELERMDYQVSRHPEFRYKTEFQSHEPEFDYLKSLEI
EEKINKIRWCQTANGALFLLSTNDKTIKFWKVQEKKIKKICNMNIDPSRAVGNGSVASSS
ISSNPKLCLANGGCTDKLYSNLNALRLPTVTSHETSLAARCRRVYAHAHDYHINSISSNS
DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEELTEVITSAEFHPIHCNMLAYSSS
KGSIRLIDLRQSALCDSHSKLFEEHEAPGSRSFFTEIIASLSDIKFAKDGRYILSRDYMT
LKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGQRVATGSYSNLFR
VFGCAAGSTEATTLEASKNPMRRQAQTTPSRPSRSLSSITRVVRRGAESPVVDANGNTFD
FATKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggtggcgatggtagtagcggaggaggaggaggaggaggcctcacggcgcca
ccgctgcctctcgagtggaaattctcacaggtgtttggtgaacgtacggcaggagaggaa
gttcaggaagttgatatcatatctgccattgagtttgataaaactggggaccatcttgct
actggtgatcgtgggggaagggttgtattatttgaaaggactgatacaaagaagcatgtt
ggaaatcaaagagagttagagaggatggactatcaagttagtcggcatccagagtttcgg
tacaagacagaatttcaaagccatgaacctgagtttgattatctcaagagtttggagatt
gaggagaaaattaacaagattcggtggtgccagacagctaatggtgccctctttcttttg
tccaccaatgataaaactataaagttttggaaggtacaagagaagaaaatcaagaaaata
tgtaatatgaacattgatccttccagagctgttggaaatggcagtgttgctagttcaagt
atttcttcaaatccaaaattgtgtcttgcaaatggtggttgcactgataaattatacagc
aatttgaatgcgcttcgtttacctacggttacaagccatgaaaccagccttgcagcaaga
tgtagaagagtttatgctcatgcccatgactatcacatcaattccatttcaagtaacagc
gatggtgaaacatttatatcagctgatgatctccgaataaatctttggaacttggaaata
agtaaccaaagtttcaacattgttgatgtgaagccagcaaatatggaagagctaacagag
gttatcacttcagccgagtttcatccaatccattgtaacatgttagcatatagtagttca
aaaggatcaattcgtctcattgatttacgacaatcagcattgtgtgactcacattctaaa
ttgtttgaggagcatgaggcacctggttcaaggtctttcttcactgagataattgcatca
ctttctgatattaaatttgcaaaggatggaagatatatacttagtcgtgattacatgact
ctcaagttatgggacataaatatggattctggtcctgtttcaaccttccaggttcatgag
tatctaagaccgaagctatgtgatttatatgagaatgattccatctttgataaatttgag
tgttgcttaagtggtgatggccaacgagtagctacaggatcctatagtaatctgtttcgt
gtgtttggttgtgctgctggaagcacagaggcaactacactggaagctagtaaaaatccc
atgaggagacaagcacagacgaccccttcaaggccttccagatccctaagcagtataact
cgtgttgtcaggcgaggagcagaaagcccagttgtagatgcaaatggaaacacatttgac
ttcgcaacgaaattgctccatttggcttggcatccaactgaaaactcaattgcttgcgct
gctgcaaacagcctgtacatgtattatgcgtaa
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