KEGG   Ipomoea nil (Japanese morning glory): 109190812
Entry
109190812         CDS       T04663                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ini03036]
    109190812
   03400 DNA repair and recombination proteins [BR:ini03400]
    109190812
Chromosome and associated proteins [BR:ini03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109190812
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109190812
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_2 HEAT_EZ ERAP1_C
Other DBs
NCBI-GeneID: 109190812
NCBI-ProteinID: XP_019196982
LinkDB
Position
Un
AA seq 1141 aa
MANSSKCVKHIESYVSSSTSPAQQAAIVDTIAALVKNDLLTLEELVREMEMYLTTTDTII
RSRGILLLGELLTQLSLKPLTDAAIQSLIGFFIERLADWKALRGALVGCLALLRRKIDVG
MITDSQAMAAAQSFLENMQVQSLGQHDRKLCFQILECLLNCYPDAVEPLGDVLVYGICES
IDGEKDPQCLVLIFRIFEALARLFPHSSGSLASYAEDLFEILGCYFPIHFTHSKSEDADI
KREELSQALMLAFASTPVFEPFAIPLLLEKLSSDLPSTKVESLKYLSYCTSKYGGDRMAK
YFEALWSALKDVLFIRPQSTLSIEFELVDGMGFQESEIMIQALELLQMVVQRSNGSFLSF
ILADEDIKTFMNSLNGLKDFDNASAQNKQRLHAVGCILSASARSSFASCDAVFQNFFTSL
MDALTFSVEIPSKDSVVLSRRFNFGALYLAVELLCACRCLVLNCDGLTPIPDFLSMAWCC
ILCGFSTSLSNSLISLLQTTSVESTPNTYVYYGVKGLQTLAMFPGSFTQVPKPIFENVLL
TLMSVITTDFNKTFLWKTALKALVDIGFYVDKSSEDEKVASFESVVMEKIGFLISSNDLT
VPLTLKLQTTFDIGMTGKKFMHRAVQELDKTLFDNLSQIFVSENVKSTELTIPLLDCYSK
NVLPWFHDNGGSEEVSLNLAFNILEKIEKSTHSSIGFQESELLDAIMIALKHAVASCSEE
NQERIIKKAFDLISSGSLKDLKPYTTPLNSNGGQLTSMLEGISCRDECIISLIASVIIAL
RPQTHIPNLKLLLQLFLMTLLKGHILSAQALGSLVNKLPLETSIKNFNLEEAIDVLFNNE
IWISCNFYDGNKCSTLDNGSAIDFSSLRINGCDVSYKIHALVGLAWIGKGLLMRGHQKIK
DITSTFVSCLLSNGNVGAFEELDGQLKDNKELEVISLRKSAADAFHVLMSDSEACLNRHY
HATVRPLYKQRFYNMVLPILLSSILEIDSPTTRSLLYRAFSHLISGAPLIAVVSDAKKVI
PVLVDCLFMLQKDALDKDIIFSVLLVLSGILMDKNAKEAVIENAHLIVHQLNNLVSYPHM
MVVRETAIQCLVALSGLPQSRIYPLRKEVLQAISKALDDPKRVVRQEAVRCRHAWLEIEG
R
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggccaattcaagcaagtgcgtaaagcacattgagtcgtacgttagttcatccacctct
ccagctcaacaggctgcaattgtagacactattgctgcccttgtgaaaaatgacttgttg
actctagaggagctggttagagagatggagatgtatttgacaactactgataccatcatc
cgctcaagagggatcctcctcctcggggaactattgacacaactatcattgaagccttta
actgatgctgctatacagagcttgataggattcttcatagagaggctggcagattggaaa
gctttgcgtggtgctctagttggttgtttggcactattgaggaggaaaattgatgttggc
atgatcacagacagtcaagcaatggctgctgcacaatcttttttggagaacatgcaagtg
cagtccttgggacagcatgacagaaagctctgctttcaaattttggaatgcctattaaat
tgctatcctgatgcagttgagccgttgggtgatgtccttgtttatggaatttgtgaatca
attgatggagaaaaggatccgcaatgcttggtgctcatatttaggatttttgaagctcta
gcacgattatttcctcattcttctgggtcacttgcaagttatgcagaggatctttttgag
attcttggatgttacttccctatccattttacacattcaaaaagtgaagatgccgatata
aagagggaggagctctcgcaagcactgatgctggcatttgcgtctacacctgtttttgaa
ccatttgcaattcctttacttcttgagaaactatcttctgatttgccgtcaacaaaggtt
gaatctctaaagtaccttagctattgcacatcaaaatatgggggagatagaatggcaaag
tattttgaagctctttggtctgcattgaaagatgttttattcattagaccacaatccact
ttgtcaatagaatttgagttagttgacggtatgggttttcaagagagtgaaataatgatt
caagcccttgagctgcttcagatggttgttcagcgaagtaatggttcattcttaagtttt
atcctggctgatgaggacataaaaacatttatgaactcattaaatgggttaaaagatttt
gacaatgcttctgcacagaacaaacagcgattgcatgcagttggttgtattctctcagct
tctgccagatcttcttttgcttcttgtgatgcagttttccaaaatttctttactagctta
atggatgctctaacgttttcagttgaaattccatctaaagatagtgttgttctttctaga
agattcaattttggagccttgtatctcgctgtcgaactactgtgtgcatgcagatgtttg
gtgttgaactgtgatggtctcacacctattcctgattttcttagtatggcttggtgctgc
atattatgtggcttctctacttcattgagcaattctttaatttctcttctgcaaacaact
agtgtggaaagcactccaaacacttatgtttactatggagttaaaggtttgcaaactctg
gcaatgttcccgggaagcttcactcaggtgccaaagcccatttttgagaacgttttgtta
acattgatgtcagtcatcactactgatttcaacaaaacatttttatggaaaactgcattg
aaagctttggtagatattggcttctatgttgataaatcctctgaagatgagaaagtagcg
agctttgaaagtgtagtcatggagaaaattgggttcttgatatcttctaatgaccttact
gtgcctttgacactcaaactgcaaacaacttttgatattggaatgactgggaagaagttt
atgcacagagcagttcaggaattggacaagacactattcgacaatttgtctcagatattt
gtcagtgagaatgtaaaatcaactgagttgacaatcccgcttttggactgttactctaag
aatgtccttccctggtttcatgacaacggaggttctgaggaagtctcattgaatcttgca
tttaatattttggaaaagattgagaaaagtacgcattccagcattggttttcaggaaagt
gaacttcttgatgcaataatgattgcactgaagcatgctgtagccagctgttcagaggaa
aaccaggagagaattattaaaaaagcttttgacctaatttcttcaggttcattgaaggat
ttgaagccttatactacaccactcaactccaatggaggacaacttactagcatgttggaa
ggcatttcttgcagagatgaatgtattatctcactcattgcatcagtcataatagctttg
cgccctcaaactcacataccgaatcttaaactgctattacagttatttctaatgaccctc
ctcaaaggtcacattctgtcagctcaggcattgggatctttggttaacaaactaccttta
gagaccagtataaaaaattttaatctggaagaagcaatagatgtgttatttaacaatgaa
atttggatttcctgcaatttttatgatggaaataaatgctccaccctggacaatggtagt
gctatagatttcagcagtctaaggataaatggttgtgatgtgtcttataagattcatgct
cttgttggattggcctggattgggaaagggttacttatgcgtggtcatcagaagataaaa
gacattactagcacttttgtgagttgcttactttcaaatggaaatgttggggcctttgaa
gagttggatggtcagttgaaagacaacaaagagctagaagtgatctctttgaggaaatct
gctgcagatgcatttcatgttcttatgagtgattcagaagcttgtttgaacagacattat
catgcaactgttcgcccactttataagcagcgattttacaacatggtgttgcctatatta
ttatcttcgattttggaaattgattcaccaactactagatccttgctataccgagccttt
tcacatttgatatctggtgctcctctgattgccgtcgtgagtgatgccaaaaaggttatc
cctgtactagtagattgcctattcatgttgcaaaaggatgctcttgacaaagatataatc
ttcagtgtcttattagtactctctggaatattgatggataaaaatgcaaaggaagctgtt
atagaaaatgcgcatctcattgtccaccaacttaataacctcgtttcctatccccatatg
atggtagtccgagaaacagcaattcagtgtcttgttgccttgtcagggctaccccaatca
agaatatatcctttgagaaaagaggttttgcaagctatatcaaaagctcttgatgatcca
aagagagttgttcgtcaagaagcagtcagatgtcggcatgcttggttagaaatcgagggt
agatag

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