Ipomoea nil (Japanese morning glory): 109190956
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Entry
109190956 CDS
T04663
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109190956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109190956
03036 Chromosome and associated proteins [BR:
ini03036
]
109190956
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109190956
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109190956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
109190956
NCBI-ProteinID:
XP_019197130
LinkDB
All DBs
Position
Un
AA seq
1045 aa
AA seq
DB search
MGSRMKVDPGSADLLHLSRFQCKRRKVSLHGAVSGQVCPETEASLPTLHSADYFTIPCLS
ELAVREFTSPGYCSRVVDFTVGRVGYGCIRFIGETDIRGLDLDHIVKFRRHEVVVYEDES
SKPAVGMGLNKPAEVTLLLKLRSLIQNIEDSSRKILENLQLKTKRQGAQFISFDSSTGEW
KFLVQHFSRFGLSDDEEEDIAMDDVSPECQDPLDMNGRELSDINEETSLVDPTLLSHSLP
AHLGLDPVKMKEMRMLMFPSEEENLDDYSGMPSHCRPRFNKESSRSPLQLQHVSHATVQK
SSPPLIRKTPLALIEYNVGSFGSGTPGSILMAQQNKGVLLKKTNAEGFRLDAKQQTPVTG
SLSHNVVDAALFMGRSFRVGWGPNGILVHSGAPVGASESIISSVINFEKVAIDQVARDEN
NKVRDELIDFCFASPLNLHKEINHETKEVEVGQCSLKLQRLVCDRLILSDVCRSYIEIVE
KQLEVPGLSSSSRIVLMHQAMVWELIKVLFSSRQVSGKPKSLEGDSEEDMIFEGKESASD
IDTEALPLIRRAEFSYWLQESVCHRVQEEVSSLNESSELQHIFLLLTGRQLDAAVELAAS
RGDVRLACLLSQAGGFTDNRSDIARQLELWSRNGLDFNFIEAERVRLLQLLAGNIHLALH
DVNIDWKRFLGLLMWYHLSPDTSLPIVFRSYQQLLNDGKAPCPVPIYIDEGPVEESLNCH
KEEKFDLAYYLMLLHANQEIDFGVLKAMFSAFASTNDPLDYHMIWHQRAVLEAVGAFSSN
DLHVLDMGLVSQLLCLGQCHLAIYVVLHMRYREDYPYLHATVIREILFQYCETWSSQDLQ
WQFIEGLGIPSPWLHEALAMYSNYYGDYSKSLEHFIECGNWQKAHTTFMTYVAHSLFLSG
EHSEIWRLTTSMEDFKAEIEDWDLGAGIYLSFYFLRSSLQEENDAMNELDSLEKKNDACA
EFISHLNESLAVWSSKLPVDARVVYSKMAEEISNLLLSDSGEGSTSEVQLSCYDTVFSAP
FPEDLRTYHLQDAVSCFTSYLSEFA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgagaatgaaagttgatccggggtccgctgacttacttcatttatcccgattt
caatgcaaaagaagaaaggtttctcttcatggagcagtttcgggccaggtttgccccgag
actgaagcttctttgcctactctacattctgctgattattttacgataccttgcttgagc
gaattggctgttagggagtttactagtcccggttattgcagtagagttgtagattttact
gttggaagggttggttatggatgtattagatttattggggagactgacataagagggctg
gatttggatcacattgttaagtttaggcggcacgaagtggttgtttatgaggatgaaagt
tccaagcctgcagttggtatgggacttaacaagcctgctgaagtaactctgttactgaaa
ctaaggtccttaatacaaaatattgaagattcatcaagaaaaatcctagagaatttgcaa
ctaaaaacaaagaggcaaggagcacagttcatttcatttgacagctcaactggtgaatgg
aaattcctggttcaacattttagcagatttggtttgagtgacgatgaagaagaagatatt
gctatggatgatgtgtctccagaatgtcaagatcctttggatatgaatggacgtgaactt
tccgatatcaatgaagaaacctccttggttgacccaacactcctctcccattctcttcca
gctcatctggggcttgatcccgtgaagatgaaagaaatgcgaatgttgatgtttccatct
gaggaagagaatttagatgattatagtggtatgccttcacattgtagaccacgcttcaat
aaagaatcctcaagatcaccattgcagttgcagcatgtttcacatgcaacagtccagaaa
agtagccccccattgattcgcaagacacctttagctcttattgaatacaatgttggtagt
tttggctcaggcactcctggttctattttgatggcacaacaaaacaagggggtgctctta
aagaaaacaaatgctgaaggatttaggctggatgccaagcagcaaactcctgtaactggt
agtctttctcacaatgtggttgatgctgcactgtttatgggtagatcatttcgagtagga
tgggggcctaatggcatccttgttcattctggtgcaccagttggagctagtgaatctata
atatcttctgtaatcaacttcgaaaaagttgcaattgaccaagtggcaagagatgaaaat
aacaaagtcagggatgaacttatagatttttgttttgcttcccctctgaatctccacaag
gaaataaatcatgaaacaaaagaggttgaggtggggcagtgcagcttaaagcttcaaagg
cttgtatgtgatcgtttgatcctttcagatgtttgccggagctatattgaaattgttgag
aagcaactggaggttcctggattgtcatcctcttctcgtattgtattgatgcaccaagca
atggtctgggaactaattaaagttctcttttcttctaggcaagtgagcgggaaaccaaaa
tctctggaaggtgatagtgaggaagatatgatatttgaagggaaagaaagcgcatcagat
atagacacagaggcactcccactgattagaagagcagaattcagttattggttgcaggag
agtgtttgtcaccgggttcaggaggaagtgagctccttgaatgagtcaagtgagctacaa
cacatattcttgctgctgacaggccgacagctagatgctgccgtggagcttgctgcttct
agaggagatgttagattggcatgtcttctgagccaagctggtggctttacagacaaccgc
tctgatattgctagacagcttgagctttggagcagaaatggattggactttaattttatc
gaagcagaaagagttagacttcttcagttgcttgctggcaacatccatttggcattacat
gatgtaaatatagactggaaaagatttttgggactgttgatgtggtatcatctttcacct
gatacttcattgcctattgttttccgctcatatcaacaacttctcaatgacggcaaagct
ccatgtcctgtgcctatttacattgatgaaggaccagtagaagagtctctgaactgccac
aaagaggaaaagtttgacctagcttattatcttatgctacttcatgccaatcaagaaatt
gattttggtgttttaaaggcaatgtttagtgcctttgcatcaacaaatgatccacttgac
taccatatgatttggcatcaacgagcagttctagaagcagttggtgctttcagttctaat
gatcttcatgttttagacatgggacttgtttcccaactgctttgtcttgggcaatgtcat
ttggccatctatgtggtgctgcacatgcgatatcgtgaagattacccatatttacatgcc
accgtgataagggaaatccttttccaatattgcgaaacttggagttctcaggatttgcaa
tggcagtttattgagggcttgggcattccttcaccatggttacatgaggcactggcaatg
tattccaattattatggtgattactcaaaatctctagaacactttattgagtgtggaaac
tggcagaaggcacataccactttcatgacttatgttgctcattctctctttttatcaggg
gagcactctgagatatggagactcacgacctccatggaggactttaaagcagagattgaa
gattgggacttaggagctggaatatatttatcattctattttctaagaagttcattgcag
gaagagaatgatgcaatgaatgaactggattctctggagaagaaaaatgatgcatgtgca
gagttcattagtcacttaaatgagtctctggctgtttggagtagcaaactacccgtggat
gcaagggttgtttattcaaagatggcggaggaaatatcgaatttgcttctatctgatagc
ggtgaagggtcaacaagcgaggttcaattaagttgttatgatacggtgtttagtgcaccc
ttccctgaagaccttcggacatatcatctgcaggatgcagtgtcatgttttacatcttac
ctttcagaatttgcttag
DBGET
integrated database retrieval system
