Ipomoea nil (Japanese morning glory): 109191431
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Entry
109191431 CDS
T04663
Name
(RefSeq) TATA-binding protein-associated factor BTAF1-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109191431
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109191431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
HEAT_ECM29
TOR1L1_N
TPR_Trm732_C
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
109191431
NCBI-ProteinID:
XP_019197636
LinkDB
All DBs
Position
Un
AA seq
1543 aa
AA seq
DB search
FIHCSFGDYVSDQVVAPVRETCAQALGAVLKYMHPSLVYETLSILLQMQHRPEWEIRHGS
LLGIKYLVAVRKEMLHDLLCYVLPACKSGLEDADDDVRAVSADALIPTAADIVSLKSEIL
HSIVMLLXDILLDLDDLSPSTSSVMNLLAEIYSQERMLPNGYGNLPSLEKQDLNLNEVVY
QNDIGEGLSSLENPHMLSTLAPRLWPFMRHSITSVRYAAIRTLERLLEAGRKRSLGEASG
SFWPSFILGDTLRIVFQNLLLESNEEILQCSGRVWRLLLQCPVDDLTDAAKAYFSFWIEL
ATTPYGSPLDTTKMFWPVALPRKSHFKAAAKMRAVKPESDPYKNISFGSAEGTSLQEXNG
DTSAHIGKIIVGGDVDISVTQTRVVTATALGVLASKLDDSSLQYVVDPLWNALASFSGVQ
RQVSSMLLISWFKELKFKDISKSEGVITVISSNFGERLLDLLACTNPAFPSKDSALPYAE
LSRTYEKMRNEARQLYHGTEASGMFKDILSSTNLDLESLSADDAVNFASKLSFLNNITTG
KSLQDXEYFDELESLKQRVLTTAGYLKCVQNNLHVTVSALLAAAVVWMSNLPAKLNPIIL
PLMASIKREQEEILQSKAAEALAELIYCCMGRKPGPNDKLIKNLCSLTCMDPCETPQAGV
LNSIEKIEEQGLLSFRSSNNRQKSKVHMLSPGDDRSKVEGFISRRGAELALKCLCEKFGG
SLFDKLPKLWDCLVEVLKPGNVEGLNPEDEKLISEAIDSVTDPQILINNIQVVRSIAPLL
DETLRSKLLTLLPCIFRCVCHPHVAVRLAASRCITTLAKSMAVNVMSAVVENVVPMLGDM
TSVHSRQGAGMLVNLLVQGLGVELVPYAPLLVVPLLRCMSDSDHSVRQSVTHSFATLVPL
LPLARGVAPPAGLSDRLSRNQEDVKFLEQLVDNSHIDDYKLSTELKVTLRRYQQEGINWL
AFLKRFNLHGILCDDMGLGKTLQSSAIVASDIAEHIAANTAENLPPSLIICPSTLXGHWE
YEIEKFIDGSLVTTLQYVGSAQERTSLRSQFNRYNVIVTSYDVVRKDVDSLRQVFWNYCI
LDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNVLDLWSLFDFLMPGFLGTERQFH
ASYGKPLVAARDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRFC
DLSPVQLKLYEQFSGSDVKQEISSMVKVNESDTGQGSDAPKASTHVFQALQYLLKLCSHP
LLVLGEKISESVSSVLSAFLPNGSNIVSELHKPHHSPKLVALQEILEECGIGIDASGSDS
PVNVGQHRVLIFAQHKAFLDIIEKDLFHSQMKNVTYLRLDGSVEPDKRFEIVKAFNSDPT
IDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRG
TLEEKVMSLQRFKVSVANAVINSENASLKTMNTDQLLDLFTPADGKKAPNVSQSSDDKFE
GDPKLTRGGKGLKAILGGLEELWDQSQYSEEYNLSHFLAKLNG
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
ttcattcactgcagttttggggactatgtttctgatcaagttgttgcacctgttcgagaa
acatgtgctcaagcattaggtgctgtgcttaagtacatgcatcctagtttagtgtacgag
acactaagtatcttgctgcaaatgcagcatagaccggagtgggagattcgtcatggtagc
ctcttggggatcaagtatctagttgccgtgcgtaaggaaatgcttcatgatttgctttgc
tatgttctcccagcatgtaaaagtgggcttgaggatgctgacgatgatgttcgagcagtg
tctgcagatgctctaataccaactgcagctgatattgtttcattaaaaagtgaaatattg
cattctattgttatgctactcnnggatattttacttgacctagatgatttaagcccatct
actagcagtgtaatgaatttattggcggaaatttattctcaagagcggatgcttccaaat
ggctatgggaacctgccatcattggagaaacaagatctcaatctgaatgaagttgtttat
caaaatgacattggagaagggttaagctctttagagaatccccatatgctgtcaactctg
gcaccaagattgtggccattcatgagacatagtatcacatctgtccgttatgcagccatc
cgcactttggagcgtttgctagaagcggggcgcaagaggagcttaggtgaagcttctggc
tctttctggccttcatttattctgggtgataccctccggattgtttttcagaacttactg
cttgaatcaaatgaagagattttgcagtgctcgggtagagtttggaggcttcttctccag
tgcccagtggatgacttgacggatgctgcaaaggcatatttttctttttggatagaatta
gcaactactccttatggctcacctctggatactacaaaaatgttttggccagtggctctt
cctcgtaaaagtcactttaaagcagctgctaagatgagagctgtgaagcctgaaagtgac
ccctacaaaaacattagctttggttcagcagaaggtactagtttacaggagnaaaatggg
gacacttccgcccacattggaaagataattgttggtggtgatgtggacatatcagttacc
caaacacgtgttgttactgccacggcattgggtgttttggcttctaagttggatgattct
tctcttcagtatgttgttgacccattatggaatgcacttgcctctttttctggcgttcaa
agacaggtatcttcaatgctgttaatttcatggttcaaagagttgaaattcaaggacata
tcaaagtctgagggagttattaccgtcatttcaagtaattttggggaaaggttgttagat
ttgttagcttgcacaaaccctgcatttccatcaaaagattcagctcttccatatgctgaa
ctttctaggacatatgagaaaatgcgcaatgaggctcgtcagctgtaccatggtaccgag
gcatctggaatgtttaaagatatattgtcatccactaatcttgacctggaaagtttgagt
gcagatgatgcagtgaattttgcatctaaactttccttcttaaataatattaccactggg
aagagtctgcaggacnnggagtattttgatgaattagagtctctgaaacaaagagttttg
acaactgctggatatttgaagtgtgttcagaataatttgcatgttactgtctcagctttg
ctagctgctgctgttgtttggatgtctaaccttccggctaaactcaacccaattatttta
ccgttaatggcatctatcaaaagagaacaggaggaaatactacaaagtaaggcagctgaa
gctctggcagagctaatctattgttgtatgggccgtaaacctggacctaatgataagtta
atcaagaacctttgtagtttgacatgcatggatccttgtgagacccctcaagctggagtt
ctgaattctattgaaaaaattgaagagcaaggtcttctgtccttcagaagcagtaataac
aggcagaaatcaaaagttcatatgctttcccctggtgatgatcgatcaaaggttgagggc
ttcattagcagacgaggagctgagcttgctttgaaatgtttatgtgagaaatttggtggt
tcgttgtttgacaagcttcctaagctttgggattgcctggtagaagtcttaaagcctgga
aatgttgagggtttgaacccagaagatgagaaacttatatctgaagctatagattctgta
actgatcctcaaattttgataaataatattcaggtggtccgttccattgctcctttattg
gatgagacattgagatcgaaacttctcacactccttccatgtatctttagatgtgtttgc
catcctcatgtggctgtgagattagccgcgtctagatgtatcacaacgttggccaaatct
atggcagtgaatgtgatgagtgcagtagttgaaaatgtggtccctatgttaggagatatg
acctctgttcattctagacaaggggctggcatgcttgtcaacttgctagttcagggactt
ggtgtggagctggttccttatgctcctcttttagtagttcctcttttgagatgcatgagt
gattctgatcattctgtgagacagagtgtaacacatagttttgccacacttgtacctttg
cttccattagcacgtggtgttgctccccctgctggtctcagtgaccgtttatccaggaat
caagaagatgtaaaatttttggagcaactggttgacaactcacacattgatgattacaag
ctctcaaccgaactaaaagtgactcttagaaggtatcaacaggaaggtattaactggtta
gcatttttgaagagatttaatctccatggcatcttatgtgatgacatggggctgggcaag
acccttcagtcatcagccattgtggcatctgatattgcagagcatattgctgcaaatact
gctgagaatctcccaccatctcttataatatgtccatcgactcttngtggtcactgggaa
tatgagatagagaagtttattgatggttctttagtaactaccctccaatatgttggttct
gctcaagagcgcacatctcttcggtctcaatttaatagatataatgttattgttacatca
tatgatgttgtccgtaaagatgttgactctcttagacaagtcttttggaactattgtatt
ctagatgagggacatatcataaagaatgcaaagtcaaaagtcactcttgctgtgaaacaa
ttgaaggcgcagcaccgtctcatattgagtggtactcctatccagaacaatgtactggat
ttgtggtctctttttgacttcctcatgccaggattcctgggaacagagagacaattccat
gcttcctatggaaaaccactggtagctgccagggatcccaaatgttcagccaaggatgct
gaagcaggagcacttgcaatggaagcattgcataagcaggtgatgcctttccttcttcgc
cgaacaaaggaagaagttttatctgatttgccagagaagattatccaagacagattctgt
gacctgagtcctgttcagctaaaactttatgaacagttttccggttcagatgttaagcaa
gaaatctccagcatggtgaaggtcaatgaatctgatactggacaaggaagtgatgcaccc
aaagcatctactcatgttttccaggcactccagtatttgttaaaactttgtagtcatcct
cttttagtgcttggcgaaaaaatttcagaatctgtctcatcagttctatcagcgtttctt
cctaatggttccaatattgtctccgaactccataaaccccatcactctcctaaactggtt
gccctccaggagattcttgaagagtgtggaattgggattgatgcttcaggttcagacagc
cctgttaatgttgggcagcatagagtattgatatttgcacagcataaagcttttctggat
atcattgagaaggatttgtttcattctcagatgaagaatgtcacatatttgcggttggat
ggatcggttgaaccagacaaacgctttgaaattgtgaaagcctttaattctgaccctaca
attgatgtcttactccttacaacacatgttggtgggcttggtttgaacctgacatcggct
gatactcttgtatttatggagcatgactggaatccaatgcgtgatcatcaggcaatggac
agagctcacaggttgggccagaaaaaagtcgtccatgtccatcgactcataatgcgagga
accttggaagagaaagtaatgagcctccagaggttcaaagtgtctgttgctaatgctgtg
attaattcagagaatgctagtttgaagaccatgaatacagaccagctgcttgatctcttt
acaccagcagatggcaaaaaggctccaaatgtatcccagagtagtgatgacaaatttgaa
ggggatccgaaattgacacgaggtgggaagggattaaaagccattcttggaggattggaa
gaactttgggatcaatcacagtacagtgaagagtataatctgagccactttttagccaag
ctaaatggttga
DBGET
integrated database retrieval system
