Ipomoea nil (Japanese morning glory): 109191653 Help Entry 109191653         CDS       T04663                                  Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03030   DNA replication ini03410   Base excision repair ini03420   Nucleotide excision repair ini03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     109191653    03410 Base excision repair     109191653    03420 Nucleotide excision repair     109191653    03430 Mismatch repair     109191653  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ini03032]     109191653    03400 DNA repair and recombination proteins [BR:ini03400]     109191653 DNA replication proteins [BR:ini03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     109191653 DNA repair and recombination proteins [BR:ini03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      109191653 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RFC1 BRCT AAA AAA_22 PTCB-BRCT RCF1-5-like_lid AAA_19 Rad17 AAA_5 AAA_30 RuvB_N AAA_assoc_2 nSTAND3 BRCT_2 AAA_18 Zeta_toxin Sigma54_activ_2 Gp44_lid AAA_28 AAA_14 TsaE RsgA_GTPase AAA_17 NPHP3_N NTPase_1 RNA_helicase AAA_16 DNAX_ATPase_lid Motif Other DBs NCBI-GeneID:  109191653 NCBI-ProteinID:  XP_019197821 LinkDB All DBs Position Un AA seq 994 aa AA seqDB search MSDIRKWFMKKHDTSTGNGNASNSAKPSASDKPSSKPEKLDGQESSGRRKTSKYFATGKA KEEKEVEELSSKRKAQRDSEELSGHGKPPPGKKAHKAVGDDDDDDFVLPTPGKDPANITP SKKLKSSSGKGVPQKSIDNDNDADDGGSCDGDTKSNLKSSASRRGGKSPSAARTSGRKMD VDESDDDGSDEKDIKTPKPGGRGRGRGAAATPASGRGRGGGGRGGFMNFGERKDPPHKGE KEVPEGAPDCLAGFTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGG RKSEKAKELGTVFLTEDGLFDMIRASKKSKTTQEPKKPKDEIRPSPKKESLQKPEAKISV ATKELTRDTSSAKRKVQSSKDTCLPWPEKYRPKIPDELVGNQALVKQLEEWLVHWDELFL NASKVKGKAKKQNDASAKKAVLLSGTPGIGKTTSAKLISQKLGFQAVEVNASDSRGKADA KIVKGIGGRTSNSIKELVSNESLHAKADRSPHSKIVLIMDEVDGMSGGDRGGVADLIASI KASKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLLQIANAEGLQVNQIALE ELAERVNGDMRMALNQLQYLSLSKSVINYDDIRQRLQASSKDEDMSPFTAVDKLFGFNAG KLKIDERVGLCMSDPDLVPLIIQENYINYRPSGVKDANGLQRMNLVARAAESIADGDIVN VQIRRYQQWQLSQMGSLASSIIPSALLHGQRETLEQGERNYNRFGGWLGKNSTMGKNYRL LEDLRFHLLASSESILERRSLRLDYMTLLRKKLTDPLRTLAKDEAVETVVDFMDSYSITQ DDFDSIMEISKFQGHSNPMDGIQPAVKAALTKAYNKGSSSRVIRTADLITLPGLKKAPKK RVAAMLEPIDENLAEENGDTLQEDEEGNSDAEEEDDLLDPEKKVQLNLQNLNSKGIQVDM KGSGSSGKKAPAGRGRGKATSKAAEKSSGSKRKR NT seq 2985 nt NT seq  +upstreamnt  +downstreamnt atgtcggatatcagaaagtggttcatgaagaaacatgacacaagtactggcaatggtaat gcttcaaactctgcgaagcccagtgcatcggataaaccttcttcaaaaccagagaaattg gatggacaagaaagttcaggtagaaggaaaactagcaagtattttgctacaggtaaggca aaggaagaaaaggaggtagaggaattatcttccaagagaaaggctcaaagagacagtgaa gaattatctggccatggtaagcccccccctggtaagaaagcccacaaggctgtgggcgat gatgatgatgatgattttgtcttacctactccggggaaggatcctgctaacatcacacct agcaaaaaattaaaaagcagttctggcaagggtgttcctcagaaatctatagataatgac aatgatgctgatgatggtggcagctgcgatggggatactaaatctaatcttaaatcttct gcaagtaggcgtggtggaaaaagtccttcagcagctcgtacaagtgggaggaaaatggat gttgatgaaagtgatgatgatggctctgatgaaaaggatattaaaactcctaagcctggt ggacgaggtcgtggtagaggagcagcagcaacaccagctagtggaagaggcagaggtggt ggaggacggggtggattcatgaattttggtgaaaggaaagatcctccgcacaaaggagaa aaggaagtccctgaaggtgctccagactgtttagctggttttacttttgttatttctggg acactagacagtttggaaagagaagaagctgaggatttgataaagcggcatggtggtcgt gttactggatctgttagcaaaaaaacgaattatcttctctgtgatgaagatattgggggg cggaaatctgaaaaggccaaggagcttggcactgtatttcttacggaggatggattgttt gacatgatccgggcatcaaaaaaatcaaagacaacacaagaaccaaagaaacctaaagat gaaattcgtccttctccaaagaaagaaagtctgcaaaagccagaagcgaagattagtgtg gctaccaaagaacttaccagggacacctcttctgctaaaagaaaagtccaatcttcaaag gatacctgtttgccatggccagaaaaatacaggccaaagattcccgatgaattagtaggg aaccaggcattggtgaaacagcttgaggaatggctagtacattgggatgagctgttcctg aatgctagcaaggtgaaagggaaggcaaagaaacagaatgatgctagtgctaaaaaagca gttctattaagtggaacacctggtatagggaagactacatctgcaaagttgatcagtcag aagctgggtttccaggctgtggaggttaatgctagtgacagccgtgggaaggctgacgct aaaattgtgaagggtattggtggacgtacatctaattctataaaagaacttgtcagtaat gaatctcttcatgctaaagcagaccgctctccacattcaaagattgttttgataatggat gaggttgatggaatgtctggtggagatagaggtggtgtggccgatcttattgctagcatc aaggcctctaagatacctataatctgcatttgtaatgaccgctacagtcagaagctaaag agtcttgtcaactattgtttactacttagcttcaggaaacccacaaagcaacagatggca aagaggttattgcagattgcaaatgcagaaggccttcaagtcaatcagatcgcacttgag gaattggcagaacgagtcaatggtgatatgcgcatggcactgaaccagttgcagtacttg tcgctttctaagtctgtaattaactatgacgatatacgacagcgtctccaagccagttca aaggatgaagacatgtcaccctttacagctgttgataagttgtttggttttaatgcggga aagttgaagatagatgagcgcgttggcttgtgcatgagcgatcctgatcttgtacctctc attattcaggagaattatatcaattatcggccaagtggtgtaaaagatgctaatggatta caaaggatgaacttggttgctcgtgctgctgagtctatcgctgatggcgatatagttaat gtacagatccgaagatatcaacagtggcagctctcacaaatgggctccttggcatcttca ataataccttctgctttattgcatgggcaaagagagacacttgagcagggtgaacgcaac tacaataggtttggtggttggttgggaaagaactctacaatgggaaaaaactacagactt ctagaggatttgcgttttcatctcctggcatcctctgaatctatcttggagaggagatct ttgagacttgactacatgactcttcttcgtaaaaagttgactgatccactaagaacactg gcaaaggatgaagctgtcgaaacggttgtggatttcatggattcatactccataacccag gatgactttgatagcattatggagatatcaaaattccaggggcactcaaatccaatggat ggaatacagcctgcagttaaagctgcactgacaaaagcatataataaaggaagcagttct cgtgtgattcgcactgctgatttaatcacccttcctggattaaagaaggcccctaagaag cgggttgctgcaatgctggagcccattgatgaaaacctagcagaggaaaatggtgacacc ctacaagaagatgaagaagggaactcagacgcagaggaggaagatgatttactcgatccc gagaaaaaggtgcagttaaatctccaaaatcttaattcaaagggtatccaagttgatatg aaaggttctggttcaagtggcaaaaaggcgccagcaggaagaggaagaggaaaagcaact tctaaagctgcagaaaagagcagtggttccaagaggaagagatga

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