Ipomoea nil (Japanese morning glory): 109191875
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Entry
109191875 CDS
T04663
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109191875
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109191875
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109191875
NCBI-ProteinID:
XP_019198095
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Position
Un
AA seq
441 aa
AA seq
DB search
MEGVMRRHRMFFAVFYVVLVLAVEANIGEYDEVWEKRARDAKKDAHGAYNPNPHEVVHHF
NHHVNKAIEGSSNRTRRSLRLKHKYHGPCLATNPIDQCWRCDPNWARNRMKLADCVLGFG
RHTTGGKGGKIYIVSNPSDDDLVNPRPGTLRHAVIQRGPLWIIFGRSMVIRLKGELIVTS
HKTIDGRGRQIHLAQGAGITLQFVKNVIIHCLHIHDIKAGGGGMIRDSLSHFGQRTRSDG
DGITVFGSTNVWIDHISMSNCADGLIDVVQSSTAVTISNCHFTHHNDVMLFGASNGYSKD
KILQITVAFNHFGQGLIQRMPRVRYGFVHTVNNDYTHWLMYAVGGSQNPTILSQGNRFIA
PPNPAAKEVTKREYTAESVWKSWAWKSDGDVMMNGAFFVQSGNRNQHFPTGDEKIKPKPG
NFVNMLTKFSGHLDCHDGKPC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgttatgcggcggcataggatgtttttcgctgtgttttacgttgttttagtt
ttggcggttgaggccaacattggtgaatatgatgaggtgtgggagaagagagcccgtgat
gcgaagaaggatgctcatggggcttataaccctaatccacatgaagttgttcatcatttc
aatcatcatgtcaacaaagcgatagaagggagtagtaatcgtacaaggaggagtttacgt
ctgaaacataaatatcacggtccatgcctcgctacaaatcccatagatcaatgctggagg
tgcgacccaaactgggccaggaaccgcatgaagctggcggactgcgtcctcggcttcggc
cgccacaccactggcggcaaaggcggcaagatatacatcgtttccaacccctccgacgac
gacctagtcaacccccgcccgggaactctccgccacgccgtcatccagcgcggcccgctg
tggatcatcttcggccgcagcatggtcatccgcctcaaaggcgagctcatcgtgacgagc
cacaagaccatcgacgggcgggggcgccagatccacctggcgcagggcgccggcataacg
ctgcagtttgtgaagaacgtcatcatccactgcctccacatccacgacatcaaagccggc
ggcggcgggatgatcagggactcgctcagccatttcgggcagcggaccaggagcgacggc
gatgggatcaccgtgtttgggtccaccaatgtttggatcgaccatatctccatgtccaac
tgcgccgacgggctcatcgacgtggttcagtcgtccacggcggtgacgatctccaactgc
catttcacccaccacaacgatgtgatgctgttcggggcgagcaatgggtattccaaagac
aagatattgcagatcacggtggcgttcaatcactttgggcaggggctgattcagagaatg
cccagagtgagatacggcttcgtccacaccgtcaacaacgactacactcactggcttatg
tacgccgtcggcggcagccaaaaccctactattcttagccaaggcaatcgcttcattgct
cctcccaatcctgcagctaaagaggtgacgaagagggaatatacagcggagagtgtgtgg
aagagttgggcgtggaagtcggatggagatgtgatgatgaacggcgcctttttcgtgcaa
tctggaaatcgcaatcagcattttcccaccggcgacgaaaagatcaagcctaagcccggg
aacttcgttaacatgctcaccaaattttccggccatctcgactgccatgacgggaagcct
tgttga
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