Ipomoea nil (Japanese morning glory): 109192398
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Entry
109192398 CDS
T04663
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04130
SNARE interactions in vesicular transport
ini04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109192398
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109192398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109192398
Membrane trafficking [BR:
ini04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
109192398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SlyX
Motif
Other DBs
NCBI-GeneID:
109192398
NCBI-ProteinID:
XP_019198567
LinkDB
All DBs
Position
Un
AA seq
218 aa
AA seq
DB search
MVKLTMIARVIDGLPLVEGLDDGRDVPDADFYKQQVKSLFKNLARGQNEPSRMSIETGPY
MFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRV
YADKAKDLNRQALIRKWAPVAVVLGVVFLLLWVRKKLW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaactaactatgattgcccgtgttattgatggcctcccgttagttgagggattg
gatgatggccgtgatgtaccagatgcagatttctacaaacagcaggtcaaaagcttgttc
aagaacctcgcacgaggccaaaatgagccttctagaatgtcaattgagactggcccttat
atgttccattatattattgaaggacgtgtgtgttatctaacaatgtgtgaccgttcttat
cccaagaaacttgcctttcaatatctggaagaccttaagaatgaatttgagcgtgtcaat
gggaatcaaattgaaactgctgctagaccttatgcttttattaagtttgacacatttatt
caaaagacaaagaaactgtaccaggacacaagaactcagcgcaatatctcaaagttgaat
gatgagctttatgaagttcatcaaataatgactcgcaacgtacaagaagttcttggcgtt
ggtgaaaagttggaccaggttagccaaatgtccagccgcttaacatcagaatctcgtgtt
tatgcggataaagcaaaagatttgaaccgtcaggctttgattcggaaatgggcccctgta
gctgtcgtccttggagttgtttttctccttctgtgggtgagaaagaagctttggtga
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