KEGG   Ipomoea nil (Japanese morning glory): 109192408
Entry
109192408         CDS       T04663                                 
Name
(RefSeq) uncharacterized LOC109192408
  KO
K03873  elongin-B
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109192408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ini04121]
    109192408
   03400 DNA repair and recombination proteins [BR:ini03400]
    109192408
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     109192408
   Cul5 complex
     109192408
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109192408
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UBL_UBAC1 Dsc3_N Ubiquitin_2
Other DBs
NCBI-GeneID: 109192408
NCBI-ProteinID: XP_019198578
LinkDB
Position
Un
AA seq 105 aa
MAMYIRVKRSRTTYFIQCEPTETILQIKEKLRVLIDQPVNDQRLILLETREVLDDTKSLA
DQKVENDAVVALTLKQDDNNDFEDVNVVRPDDFYQSRDPDSSTNW
NT seq 318 nt   +upstreamnt  +downstreamnt
atggcaatgtatatccgtgtcaagcgcagtaggacaacctactttattcagtgtgaacca
actgagacaattttacaaatcaaggagaaattgcgggttcttatagatcaacctgtaaat
gatcagcgcctgattctattggaaactagggaggttttggatgacacaaagtcattggcg
gatcagaaggttgagaatgatgctgtagtggcactgactctgaaacaagatgataataac
gattttgaggacgtgaatgtggtgagaccggatgatttttaccaatcccgcgatccagac
agcagcaccaattggtga

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