Ipomoea nil (Japanese morning glory): 109192461
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Entry
109192461 CDS
T04663
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109192461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109192461
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109192461
mRNA degradation factors
5'-3' decay
Lsm complex
109192461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
109192461
NCBI-ProteinID:
XP_019198656
LinkDB
All DBs
Position
Un
AA seq
128 aa
AA seq
DB search
MSWASAEDIYLSTSLANYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERLIVGDI
YCDMPLGLYVIRGENVVLIGELDLDKDELPPHMTRVSVPEIRRAQKAEREASDLKGTMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctagtgcggaggacatttatctctctacctctcttgccaattatcttgac
aagaaaattcttgtgttgttacgagatggtcgaaagcttttggggatacttcgctctttt
gaccaatttgccaatgctgttcttgaaggagcttgtgaacgtcttattgttggtgatatc
tattgtgacatgccgttaggattatatgtaatccgtggagaaaatgtcgtcttgattggt
gagctggatttggataaggacgaacttccgccacatatgacccgcgtttcagtaccagag
atacgaagggcgcaaaaagcagaaagggaggcatcggatctcaaaggcacaatgcgaaag
aggatggaattcctcgatatggactga
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