KEGG   Ipomoea nil (Japanese morning glory): 109192729
Entry
109192729         CDS       T04663                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109192729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109192729
Enzymes [BR:ini01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109192729
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     109192729
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 109192729
NCBI-ProteinID: XP_019198972
LinkDB
Position
Un
AA seq 1696 aa
MLQAVEGASEAVEAVTFSFMTAKEVRRHSVVKVTNPNLLDLVGGPTPGGLYDPALGPSNE
GAECKSCGQRSFNCPGHCGHIDLVSPVYNPLLFDMLYNLLQRTCLFCFHFKASRREVENC
ASQLRLIAKGDIIGAKRLGEASSELGEEFSNGYIDSDPVDCEGSHMSGLTDDFGSQDHFD
HNKQQPNWDNFQFTEAMAVLNKFLRPKPVKCNKCKAKNPKISKPTFGWLHMDGIANTVLR
ENIIGGHKLEGWSTGGAKENITSEVVNDFETAETNSFPTTDGVENSMTPGSREDTVYHEL
EKQKRILSGPLLPSQVRDIIKLLWENEASICSFICDIQSQSLNKPDKVAGHSMFFLEAVL
VPPIKFRPPAKGGDSVMEHPHTVMLNKVLQSNIALGNAHVNTTERSKIINRWMELQQSVN
VLFDSKTAMAQGQKDVGTGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIG
IPPYFALRLTYPERVTPWNVAKLRDAIINGPEIHPGAMSYSDRVSTFKLPPHRKMRVAVS
RKLPSSSGVVTQSGKNSEYEFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE
KTLRMHYANCSSYNADFDGDEMNVHFPQDEVSRAEAYNIVNANEQYIVPTKGDTVRGLIQ
DHIVSAVILTMKNTFLTLDEFNQLLYGSGVFMAGHGSFSGDRSRKVSTVDSESFLQPVLP
AVWKPKPLWTGKQVITAILNHLTRGFAPCTIRNKGKVPEKYFSKDKDNTADNKFIIWKNE
FVRGVLDKAQFGKFGLVHTVQELYGSNIAGVLLSAFSRLFTIFLQTHGFTCGLDDLIILP
DYDSRRKEHLEGNDVGEEVHANFVKFKPGEIGPVELQLEIEKVISTDKENAVAFLDMKMK
NKLNQKAENMDKDLLLKGLLRPFPKNCISLMTVTGAKGSTVNFQQISSYLGQQELEGKRV
PRMVSGKTLPCFPPWDFTARAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSG
YLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGIDVHRTSFLKNFKALQKNEETIR
QKFHPARQFNSYIEKLPNGLEERVKKFWMERKAKLDKNSKKSLAKHVQEERLENQVEQLT
ADKKKLASFLKLVEQKYLFSLVQAGEPVGVIAGQSVGEPSTQMTLNTFHLAGRGEMNVTL
GIPRLQEILMTASDVIKTPFLSCPFLGWTSRDDAQSLLAKVNKITVADMIESMEVHLLPI
SIHNNNISQVYELIVKLKKHDSVSLKDCKYTLTSAFLRELEDAIENHLSLLSKISGIKNF
KSSAQSVASNETDENASGAKSQEDMADDDDGDEEDDRTEDLGSDAQKRKQQATDEMDYDD
GSDNELAEHDSSSEMKNDETDDVNSREEEAGDDDDDDDDDDDDDDDETELRESSKPKSSE
EKTESSTKVKQKKEIFVKKESDRAIFVGTKGSCFMVHFRFTNEPHILLAQVAQKTAKKVY
IKSSGKIHQCRMVKFDVDENTVLWDGEKTEKAKKLPNNESKNAPFYWALKAAGVDFGAFW
ELQDELDVNRIYSNNIHAMLQTFGVEAARASLIREVKTVFGIYGVEIDFRHLSLIADYMT
HNGGYQPMSRHGRIADSLSPFLKMSFETASKFIVEAASHGMTDNLDAPSSRICLGLPVKM
GTGSFDLMQKLEIDAQ
NT seq 5091 nt   +upstreamnt  +downstreamnt
atgcttcaagcagttgagggtgcgtctgaggccgttgaggccgttactttcagtttcatg
acggccaaagaggtacggcgccacagcgtagtgaaggttaccaatccgaatcttcttgat
ttagtggggggtccaactccagggggtttatacgacccagccttgggtccttctaatgag
ggtgctgagtgcaaatcatgtggtcagcgttcatttaactgtccaggccactgtggtcat
attgatcttgtttctcccgtctacaatccattgctgtttgatatgctgtataatcttttg
caaagaacatgcctattttgctttcattttaaggcaagcaggagagaggttgagaactgt
gcctcccaattgagattaatagcaaaaggtgatattataggggccaaacgattaggcgaa
gcatcttcagaattgggtgaagaattttcaaatggctacattgatagtgatcctgtggac
tgtgagggaagccatatgtcaggccttactgatgattttggctcacaagatcattttgac
cataataaacagcagccaaattgggacaattttcagtttactgaagctatggcagtgttg
aataaatttctaaggccaaagcccgttaagtgcaacaaatgcaaagcaaaaaatcccaag
atcagtaaaccaacttttggatggcttcatatggatggcattgcaaacacagtccttcga
gaaaatattattggaggtcataagttggagggatggagcacaggtggagccaaagaaaat
attacttctgaggttgtgaatgactttgaaactgctgaaaccaactcattcccgactacg
gatggagtagaaaattctatgacacccgggagtcgtgaagataccgtgtatcatgagttg
gaaaagcagaaacgtattctttcaggacctcttttaccttctcaggtcagagatattata
aagctcttgtgggaaaatgaagcttctatctgctcttttatctgtgacattcaaagccag
agtcttaataaacctgacaaggtagcagggcactctatgttcttcttggaggctgttctt
gtcccgcctatcaaattccgtccacctgcgaaagggggagattctgtaatggagcatcca
catactgttatgttaaacaaggtccttcagtccaatatagccttggggaatgctcatgtt
aacactactgaacgttctaagatcatcaaccgatggatggaacttcaacaatctgtaaat
gttttatttgatagcaaaactgcaatggctcaaggtcaaaaagatgttggtactggcata
tgccaattgctggaaaagaaagagggtatcttccgccagaaaatgatggggaagagggtc
aattttgcatgccgatctgttatatctccagatccttatttggctgtcaatgaaattggt
atcccaccttattttgctctccggctaacttatccagagagagtgactccatggaatgtt
gccaaattgagggatgctattatcaatggccctgagatccatcctggagctatgtcatat
tctgatagagtatccacatttaagctgccaccacatagaaagatgcgtgtagcagtatct
cgaaaattgccttcttctagtggcgtggtaacacaatcagggaagaacagtgagtatgaa
tttgagggaaaagttgtataccggcacttgcaggatggggatattgtgcttgtcaatagg
cagccaacacttcacaaacccagcataatggcacacgtagttcgtgttttgaagggggag
aaaacgcttcgcatgcattatgctaattgcagctcttacaatgccgattttgatggtgat
gagatgaatgtccattttcctcaagatgaagtttctcgtgctgaagcctataacattgta
aatgctaatgaacaatacatcgttccaacaaagggagatactgttagaggcctgattcag
gatcatattgtaagtgctgtcattcttacaatgaagaatacatttttaactcttgatgag
ttcaaccaacttctctatgggtctggtgtgttcatggcgggccatggttcgttttctgga
gatcgttctcggaaagtttcaacggtagactctgagagttttctgcagcctgtattgcct
gcagtatggaaaccaaagcctctttggactgggaagcaggtcattactgcaattttaaac
catctgacaagaggtttcgcaccttgtaccatcagaaacaaagggaaagttccggagaaa
tacttctccaaagataaagataatactgctgataataagtttatcatttggaaaaatgag
tttgtacgtggtgtacttgacaaggcgcagtttgggaaatttggtttggtccacactgtt
caggagctgtatgggtcaaacattgcgggagtgttgctctctgcttttagtcgattattc
accattttcttgcagactcatggcttcacatgtggattggatgaccttataatattgcct
gactatgactccagaaggaaagagcatcttgaagggaatgatgttggtgaagaagttcat
gctaattttgttaagttcaaacctggagaaataggtcctgtagaactccagctggaaatt
gaaaaagttattagtacagataaagaaaatgctgtagctttcttggacatgaagatgaaa
aataaactgaaccaaaaagcagaaaacatggacaaagatttgcttctcaaaggattattg
agaccattccccaagaattgcatctctcttatgacagtcactggggctaagggtagtacg
gttaattttcaacaaatatcatcatatcttggccaacaagagttggaaggaaagcgagtg
cctcggatggtttctgggaagactttgccatgctttcccccctgggatttcactgccagg
gcaggaggctttatcactgaccgttttcttactggtctccgtcctcaggaatattacttt
cactgcatggctggtcgtgaaggattagtagatactgctgttaagacctctcgcagtgga
tatcttcagaggtgcttgataaaaaatcttgagagcctcaaagtttgttatgattatact
gtccgtgatgcagatggctcgatcatccaattttactatggtgaagatggtattgatgtg
catcgaactagctttctcaaaaacttcaaggcacttcaaaagaatgaagaaaccattcgt
caaaagtttcatcctgcacgccaattcaattcttatattgaaaaattgcctaatggactt
gaagaaagggtgaagaagttctggatggagaggaaggcaaagttagataaaaactcaaag
aagtcattagcaaagcatgtgcaagaggaacgtcttgagaatcaagtggagcagctaact
gcagataaaaagaagctagcatcctttctcaaattagtagaacagaagtatttgtttagt
ctggtgcaagctggggaacctgtaggtgtaatagctggtcagtccgtaggtgaaccatca
actcagatgacacttaacactttccatcttgctggccgtggggaaatgaatgtcacactt
ggtattccacgtcttcaggagattttgatgacagcttctgatgtgattaagactcctttt
ttgtcctgtcccttccttgggtggacatcaagggatgatgcccagtcccttctagcaaaa
gtgaataagatcactgtcgcagacatgattgagagcatggaagtccatctattgccgata
tcaattcacaacaataacatttctcaagtttacgaacttattgtgaagctcaaaaaacat
gattctgtctcgttgaaagattgcaagtataccctcacatctgcctttttgagggagttg
gaggatgcaattgaaaatcatttgtccttgctttctaaaattagtggcataaaaaatttc
aaatccagtgctcagtcagttgcatcgaatgaaacagatgaaaatgcttccggtgccaaa
tctcaagaagatatggctgatgatgatgatggtgatgaggaggatgatagaactgaggat
cttggttctgatgcacaaaaaagaaaacagcaagctacagatgagatggattatgacgat
ggatctgacaatgagcttgctgaacatgattcatcgtctgaaatgaaaaatgatgagact
gatgatgtcaatagtagggaggaggaagctggagatgatgatgatgatgatgatgatgat
gatgatgatgatgatgatgaaactgaactgagagaatcatcaaagcctaaatcaagtgag
gaaaagaccgagtcatcaactaaagtaaagcaaaaaaaggaaatctttgtgaaaaaggaa
tctgacagggctatttttgtgggaacaaaagggtcatgctttatggtccatttcagattt
acaaatgaacctcatattttactagcacaggtggctcagaagactgcaaagaaagtttac
ataaagagttctgggaagatccatcagtgcagaatggttaaatttgatgtggatgaaaat
acggtactttgggatggggagaaaacggagaaagccaagaagcttccgaacaatgaaagc
aaaaatgctcccttttattgggcactgaaagctgctggagtggattttggtgcattttgg
gaattgcaggatgaacttgatgtgaatcgaatatacagcaataatatccatgccatgctg
caaacatttggggtcgaagctgccagggcaagtctcatcagagaggtgaagactgtgttt
ggtatttatggtgttgagattgattttcggcacttaagcctgattgcagattacatgacc
cacaatggtggctaccaaccaatgagcagacatggaagaatagctgattcattgtcaccc
tttttgaagatgtcttttgaaacggcgtcgaaatttatagtagaagcagcatctcatggt
atgaccgacaacttggatgcaccatcttccagaatatgccttggcttacccgtcaaaatg
ggtactggttcttttgacttgatgcaaaagttggaaattgatgcacaataa

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