Ipomoea nil (Japanese morning glory): 109192826
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Entry
109192826 CDS
T04663
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ini03000
]
109192826
Transcription factors [BR:
ini03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109192826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
109192826
NCBI-ProteinID:
XP_019199073
LinkDB
All DBs
Position
Un
AA seq
490 aa
AA seq
DB search
MEDVPCQILQRGKERTKPSKGCSDSWFRSVGILTKSAVVATGRRVVLPSSDSNFSDWAVA
SSSATHSSAAAAFGDLSLGFNAAPNSAVDGGAASAAAGHVGVWSSSSARQMQQQINHGVP
PDMGMFVVAPAASFLHHHNQNHPACISFDGSSPAATALGVGVGVNVIPLLADDLVVNSSH
RGRGGGGLQLWQSQDAAAAAVAAAAGQNSSSTSAAADISYTKKPGEHPHGSPSSNSQSFF
QLQGGGGGAGGATASTCQDCGNQAKKDCVHRRCRTCCKSRGLDCTTHVKSTWVPAARRRE
RQQGSHPSSPAAVTASCSQSVSSGSKKPRLVLGNNSQTSTSNNTATTPRSFDTGDSGGGG
GSMPKQVTAPAEFRCVRVSPVDGGEDDEFAYQAVVRIGGHVFKGFLYDQGLDNDGDDHAG
NNPHHPGLFPNISDLNLGARGASNNVILGSGHGTTSSPPPPPPILAASSSEPHDIFGMGG
GSNFGIGNPF
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtgccgtgccagattctacagagaggaaaagaaaggacgaaaccctctaaa
ggctgttctgattcctggttccgttccgtcggaatattgacgaaatctgcagttgtggct
actggtaggcgggtggtgttaccatcttcagatagtaatttttccgactgggctgtggct
tcttcttctgctactcattcttctgctgctgcagcctttggggacctatctttaggtttt
aatgcagccccaaactccgccgtggacggcggcgccgcctccgctgcggcaggccatgtt
ggggtgtggagctcctcttccgctaggcagatgcagcagcagatcaaccatggagttccg
ccggatatgggcatgttcgtggtggcgccggcggcctcttttctccaccaccataaccag
aaccaccccgcctgcatcagctttgacggatccagccccgccgccaccgcgctcggggtt
ggagtgggtgtcaatgttattcctttgctcgccgacgatttggtggtgaatagcagccac
cgtggtcgcggcggcggaggattgcagctgtggcagagccaagatgcggcggcggcggcg
gtggcggctgcggctgggcagaactcttccagtactagcgcggcggcggatattagttat
accaagaagccgggcgagcacccccacggcagccctagtagtaattcccagagttttttt
cagcttcaaggcggtggtggtggcgccggcggcgccaccgcctcgacttgtcaagactgc
ggaaaccaagcaaaaaaggactgcgtccatcggaggtgccggacttgttgcaagagtcga
gggttagactgtacgacccacgtgaaaagcacgtgggttcccgcggcccgccgccgcgaa
cgccagcaaggctctcacccctccagccccgccgccgtgacggcgtcttgttcgcagtca
gtttcctccggcagcaagaaacccaggctagtcctgggcaataattcccaaacatcgact
tcaaacaacacggccaccacgccgagaagcttcgacaccggcgacagcggcggcggcggc
gggtcgatgccgaagcaggtaaccgccccggcggagttcaggtgcgtgcgcgtgagcccg
gtggacggcggcgaagacgacgagttcgcttaccaggccgtagtgagaatcggcggccac
gtcttcaaaggcttcctatacgaccaaggcctcgataacgacggcgacgatcacgccgga
aacaatccccatcaccccggattattccccaacatatccgacttaaacttgggcgcccgt
ggagccagtaacaacgttattctcggttccggacatggtacaacctcgtctccgccgccg
ccgccgccaattcttgcagcttcatcgtcagaacctcacgacattttcggaatgggaggg
ggttcaaattttggtattggaaaccctttctag
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