Ipomoea nil (Japanese morning glory): 109192993
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Entry
109192993 CDS
T04663
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109192993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109192993
03009 Ribosome biogenesis [BR:
ini03009
]
109192993
04131 Membrane trafficking [BR:
ini04131
]
109192993
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ini04147
]
109192993
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109192993
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109192993
Membrane trafficking [BR:
ini04131
]
SNARE
SNARE associated proteins
Others
109192993
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109192993
Exosome [BR:
ini04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109192993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
Mg_chelatase
nSTAND3
AAA_28
AAA_18
ATPase_2
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
AAA_7
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
NACHT
Vps4_C
DUF815
Sigma54_activat
Zeta_toxin
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
109192993
NCBI-ProteinID:
XP_019199285
LinkDB
All DBs
Position
Un
AA seq
807 aa
AA seq
DB search
MSHQAESSDSKSTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPATMEKLQLFRGD
TILIKGKKRKDTVVIALAEDACEEPKIRMNKVVRTNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGDLFESYLKPYFLEAYRPLRIGDHFLVRGGMRSVEFKVIETDPREYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
QDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTHGFSGADITEICQRACKYAIRENIEKDIEREKKRAEN
PDSMDEDDDDEVSEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGGAGAASGSDPFATSNAAADEDDLYS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccaggccgagtcatccgactcgaaaagtactaagagggatttctctacagcg
attttggagaggaagaaggcgccgaataggcttgtcgttgacgaggcggttaacgatgat
aactctgtcgttgctctgcaccctgccaccatggagaagctccagctcttccgcggggac
acaattctgattaagggcaagaaaaggaaagatactgtggttattgcccttgctgaggac
gcgtgtgaagagccaaagattaggatgaacaaagttgtccgaacaaatttgagggtccgg
cttggggatgttgtgtctgtacaccagtgtccagatgttaagtatgggaagcgcgtgcac
atacttcccatagatgatacaattgaaggggttactggagatctttttgaatcatatttg
aaaccttactttttggaagcatatcgacctttgaggataggagaccatttccttgttaga
ggagggatgagaagtgtggaattcaaggtcattgaaactgatcctagggaatattgtgtt
gttgctccagacactgaaatattctgtgagggggaaccagtgaagagggaggatgaggat
agacttgatgaagttggctatgatgatgttggtggagtaagaaaacaaatggctcaaatt
cgtgaattggtcgagctgccgttgaggcatccccaacttttcaaatcaatcggtgtgaaa
ccacccaaggggattttgctttatggccctcctggttctggaaagacacttatagcaaga
gctgttgctaatgaaactggtgcatttttcttctgtatcaatggtccagaaattatgtcc
aagttagctggagagagtgaaagcaatcttaggaaggcatttgaagaggctgaaaagaat
gcaccatctatcatatttattgatgaaattgattcaattgcccccaagcgggagaagaca
catggtgaagttgagagaagaattgtctcacaactattgactctaatggatggactgaaa
tcccgtgctcatgttatagttattggagctacgaatcgtcctaatagtattgatcctgct
ctcaggagatttggtaggtttgacagggaaatagacattggtgttccagacgaagttgga
cgtcttgaagttcttcgcattcataccaagaatatgaagcttgctgaagatgttgatctg
gagaaaattgctaaagacactcatggctatgttggtgctgatcttgctgctctctgcact
gaagctgcacttcaatgcattagagaaaagatggatgtcattgatctagaggatgaaaca
attgatgctgagattttgaattccatggccgttacaaacgaacacttccaaactgctctt
ggaacaagcaatccttctgctttgcgtgagacagttgttgaagtgcccaatgtcagctgg
caagatattggaggccttgaaaatgttaagagagagcttcaagagactgttcaatatcct
gtggaacacccagagaaattcgagaaatttggcatgtcaccttccaaaggtgttcttttc
tatggtcccccaggatgtgggaaaactctactggccaaggcaatagcaaatgaatgtcaa
gccaacttcattagtgttaaagggccagaattgctcaccatgtggtttggagagagtgag
gccaatgttcgagaaatttttgacaaggctagaggatcagccccatgtgttctgttcttt
gatgagcttgactctattgccactcagagaggaagcagtgttggagatgctggtggtgca
gctgatcgagttcttaaccaacttctgactgaaatggatggcatgactgcaaagaagact
gttttcataattggggctacaaataggcctgatataattgatcctgctcttcttcgccct
ggccgacttgatcagttaatttatattcctcttcctgatgaagattcacgccatcagatc
ttcaaggcttgccttagaaagtctcctctttcgaaagatgttgatttgagagctcttgca
aaatacactcatggattcagtggagctgatattaccgagatctgccaacgggcctgcaaa
tatgccataagggagaacattgagaaagatatagagagggagaaaaagagggcagagaat
ccagactccatggatgaggacgatgatgatgaggtgtcagagattaagcctgcacatttt
gaggagtctatgaagtacgctcgtcgcagtgtgagtgatgctgatatacggaaatatcaa
gcatttgctcagaccttgcagcagtctcgaggatttggaactgaattccggtttgcagag
tcagggggagctggtgcggcttctggatctgatccatttgcaacttctaatgctgcagct
gacgaagatgacttgtatagttag
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