Ipomoea nil (Japanese morning glory): 109193020
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Entry
109193020 CDS
T04663
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109193020
Membrane trafficking [BR:
ini04131
]
Protein recycling
Others
EARP complex
109193020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
109193020
NCBI-ProteinID:
XP_019199328
LinkDB
All DBs
Position
Un
AA seq
1124 aa
AA seq
DB search
MQSNSLPFPLIPLTLFNGAELSEGGFELSRYLFLGSLLFSSPGGTAGGMDLSKVGEKIFS
SVRSARSLGLLPASPSDRPEVPARAAAAAAVARVLAALPPHQRHSLSSSSEELSSIYGSR
PSKVLNDLEEEFYEEDFDPVRHVLEHIPTDENELAYFEEKAASRLAQLDRIAERLSRHVM
QHHEVMVKGMNLVRELERDLKVANVICMNGRRHLTSSRNEISRDLIVHRNSKKKQALLDM
LPILTELRHALDMQAALETLVEEGNFSKAFQVLSEYLQILDSLSQLSAVQEMSHGVEVWL
GKTLQKLDALLLGVCQDFQEESYITVVDAYALIGDVSGLAEKIQSFFMQEVLSDTHSVLK
TLVQTDFENTNVQGARLTYSDLCIQMPESKFRQCLLATLAVLFKLMCSYHAILSFQPVDK
ILCEVFCDIYVSACQTLAMDEKQGEVFALAGDIEHVGTIAQTPVVSSTGEMPATCVSLTD
NIAAFHPSNIDNGEEVRDGGETASSSGSPWFQLRKDAATFVSQTLHRGRRNLWQLTTSRV
AVLLSSPVVCSTSIHQFLTMYEDLNTFILAGEAFCASEAVEFRQKVKFVCESYFVSFHRQ
NIYALKLVLEKENWLILPPEVTQIVSFAGLVGDGAALIASTSNSLDTRLGHAHKSKYLAQ
TNKRSGFSNWLKNENPFLVKLNSNTNEHTDSYFPGSPREVGSSNGSSFKKDSTQEDHAEN
NTNGSASLSEDENEDLHADFIDEDSQLPSRISKPSHSRHRSALSNDEEMTAQTGSSLTLL
RLMDKYARLMQKLEFVNVELFKGISQLFGIFFHFVFESFVNQSALPGGKVLTDMLPHKLK
TALSRITQDCDQWMKPQSSPFNSSSPTSSNTPFAHMDVTPTSPPSLLAGASFSLKERCAG
ADTISLVARLLHRSKSHLQSMLPKKNSATVEDVYVHLVDAVPDLVEHIHRTTARLFLHIN
GYVDRIANAKWELKDLGLEHNGYVDLLLGEFKHYKTRLVTGGIQKEVQDLLLEYGLDNVA
EILVEGLSRVKRCTDEGRALMSLDLQVLINGLKHFVPIDVRPKLQIVETFIKAYYLPETE
FVHWSRGHPVCISISDTYTIYFIPFITSTKRKLFFAFIKLAGIQ
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccaactcgctgcctttccctctgattccacttacgttgttcaatggtgctgaa
ttgagcgaaggcgggtttgagctttccaggtatttgttcttgggctccctgctcttctca
tccccaggcggtactgctggcggcatggacttgtctaaggttggagagaagatcttcagt
tccgttcgctccgcccgatctcttggccttcttcccgcttctccttccgatcgccctgag
gttccagcacgagctgcagcggcagctgctgttgcacgtgttcttgctgcactacctcct
catcaaaggcatagtctttcatcaagctctgaagaattaagctcaatatatgggagcaga
ccttccaaagtgttgaatgaccttgaggaagaattttatgaagaggattttgatcctgta
aggcatgttttggagcatattccaactgatgagaatgaactggcatattttgaagaaaag
gctgcttctagattagcacagttggatagaattgctgaacgcctttcgcgccatgttatg
cagcatcatgaagtcatggtgaaaggaatgaatcttgtcagggaactggaaagagacttg
aaggttgcgaatgttatttgcatgaatgggcggagacatcttacatcatcaaggaatgaa
atatcaagggatcttattgtgcacagaaattctaaaaagaaacaagcgcttttggacatg
ctccccatcttaacagagctccgccatgcactggacatgcaagcagctcttgaaactctt
gtagaggaaggaaacttctctaaggcattccaagtactctccgagtatttgcaaattctg
gatagtttatcacaactttcagcagtacaagaaatgagccatggtgttgaggtgtggttg
ggaaagactcttcaaaagttggatgcacttttattaggagtatgccaggatttccaagag
gagagctatataactgtggttgatgcgtatgcactaatcggggatgtttctggtcttgct
gaaaagatacaaagtttctttatgcaggaggttctctctgatacacacagtgttctgaag
actcttgtgcaaacggactttgaaaataccaatgttcaaggtgcaaggctcacatacagt
gatctgtgcattcagatgcctgaatccaaatttaggcagtgtttgttggcaaccctagct
gtactatttaagttgatgtgttcatatcatgcaatcttgagcttccagccagtggataag
attttatgtgaagtattttgtgatatctatgtctctgcctgccaaacccttgctatggat
gagaagcagggtgaggtttttgcacttgcaggggacattgaacatgttggtacaattgca
caaactccagttgtatcctccactggagagatgccagcaacctgtgtatctttgacagat
aatattgcagcttttcatccttcaaatatagataatggtgaagaggtaagggatggtgga
gagacagcatcaagcagcggatcaccctggtttcagctgcgtaaggatgctgcaactttt
gtttcacaaaccttacatagaggccggaggaatctctggcaacttacaacaagtcgtgta
gcagtgttactttcgtctcctgttgtgtgttctacaagtattcatcagttcctaacaatg
tatgaagatctgaatactttcatcttggctggggaagctttctgtgcgagtgaagcagtt
gaattcaggcagaaagtgaaatttgtttgtgaaagttattttgtttctttccatcggcag
aacatatatgcactgaaattggtgctggaaaaggagaattggctgatattgccaccagaa
gtaacacaaatagtaagttttgctggtctcgttggtgatggagcggcattgattgcttca
actagtaactctctcgatactcgattggggcatgcccataagtcaaaatatcttgcccaa
accaataagaggagtggattttcaaattggctgaagaacgagaacccctttttggtgaaa
ttgaattctaatacaaatgagcacactgattcttattttcccggatcgcctagagaagtt
ggaagctctaatgggagttctttcaaaaaggattctactcaagaagaccatgctgaaaat
aatacgaatgggagtgcttctctatcagaagatgaaaacgaagatcttcatgctgatttt
attgatgaagatagtcaacttccaagccggatttcaaagcctagtcattcaagacatcgt
tctgcactttcgaatgatgaagaaatgacagcacaaacaggatcgtctcttactctccta
aggttaatggataaatatgcaaggctaatgcagaagctggagtttgtaaatgttgagttg
ttcaagggaattagccaattgtttgggatcttttttcactttgtatttgagagctttgtc
aatcagagtgctctccctggtggaaaggtcttgacagacatgcttcctcacaagctaaag
actgcattatcaagaataacacaggattgtgaccaatggatgaaaccacagtcttcacca
tttaattcatcttcacccacatcttcaaatacaccattcgctcatatggatgtcacacct
acaagtccgccaagtctcttagctggtgcatctttcagtctcaaggaaagatgtgcaggt
gctgacactatatctcttgttgctcgattgttgcatagatctaaatctcatcttcagtca
atgcttccgaaaaaaaattcagcaactgttgaagatgtttatgtgcatttggtggatgct
gtaccagaccttgtagaacatattcacagaacaactgcaaggttatttctccacataaat
gggtatgttgataggattgctaatgctaaatgggagttgaaagatcttggattggagcac
aatggatatgtagacttgctgctgggagaatttaaacactacaaaacgaggcttgttact
ggaggaattcaaaaggaggtccaagacctcctcttagaatatggactagataatgttgct
gaaattcttgttgaaggcttatctagggtgaagaggtgcaccgatgaggggagagctctc
atgtcactagatcttcaggtattgatcaatggcctaaagcattttgttcccatagatgtg
aggccgaagttacagatagtcgagactttcatcaaggcctactaccttccagaaaccgag
tttgtgcattggtcacgcggtcatccagtatgcatttctatttcagatacatacactata
tatttcattccttttatcacgagtaccaaacggaaactattttttgcttttataaaactt
gcaggaatacagtaa
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integrated database retrieval system
