Ipomoea nil (Japanese morning glory): 109193109
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Entry
109193109 CDS
T04663
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109193109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109193109
Membrane trafficking [BR:
ini04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109193109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40
Beta-prop_HPS5
zf_RING_Vps8
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
WD40_Prp19
Beta-prop_EML_2
zf-RING_2
Beta-prop_WDR11_2nd
zf-HC5HC2H
EIF3I
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
109193109
NCBI-ProteinID:
XP_019199475
LinkDB
All DBs
Position
Un
AA seq
960 aa
AA seq
DB search
MYSKSENGVDGDDEREEEESEEDEEEEEEDEPRLKYQRMGGSVPSLLSNDAASCIAVAER
MIALGTHGGSVHILDFLGNQVKEFHVHTAAVNDLCFDVEGEYIGSCSDDGSVVINGLFTE
ERMKFEYHRPMKAIALDPGYANKSSRRFVTGGLAGQLYFNVKKWIGYRDQVLHSGEGPIH
AVKWRASLVAWANDAGVKVYDAANDQRITFIERPRGSPHPEHLLPHLVWQDDTLLVIGWG
TSVKIAVIRTNQNKGVNGTYKHIPMSSLNQVDIVASFQTSYFISGIAPFGDTLVILAYIT
GEEKEKDFSSTVPSRQGNAQRPEVRVVTWTNDELATDALPVHGFEHYKAKDYSLAHAPFS
GSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRLVIVSSHLIYWDAEDHINWLLQHGCHEKA
LEAVEASKGRSELVDEVGSRYLDHLIVERQYAEAASLCPKLLRGSASAWERWVFHFAHLR
QLPVLVPYIPIENPRLRDTAYEVALVALATNPSFHKDLLATVKSWPPGIYSTSPVISAIE
PQLSTSSMTGPLKEALAELYVIDGHHDKAFSLYADLMKPDLFDFIEKHNLHDAVSEKVAQ
LMMIDCKRAIPLLLQHRDLIPPPEVVSQLMAAGNEGDSRYLMHLYLHALFETNPHAGRDY
HDLQVELYAEYDPKMLLPFLRSSQHYTLEKAYDICVKRNLLKEQVFILGRMGNSKQALAV
IINKLGDIEEAIEFVNDQHDDELWDELIRQCLNKAEMVGVLLEHTVGNLDPLYIVNMLPN
GLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYKEAKRGIHLSDEVDEA
RSKRGEQRASNLVDRTLSIKSMEVKSKTRGGGRCCICFDPFSIQSISIIAFFCCHAYHLT
CLMESTNSVSSKKEAAAPSQGASSYYEYDNGEVDEDEDEDEATSSGAPRMRCILCTTAAG
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgaagtcggaaaacggagtcgacggtgacgacgagagggaagaagaagagtcc
gaagaggacgaggaggaagaagaagaggatgagccgagactcaagtatcagagaatgggc
ggcagtgtgccgtcgctcctctccaacgacgccgcctcctgcatcgccgttgctgaacgg
atgatcgccctcggcactcacggtggctcggttcacattcttgatttcctaggcaatcag
gtaaaggaatttcatgttcacactgctgcagtgaatgacctttgctttgatgtggaaggt
gaatacattgggagctgttcagatgatgggtcagttgtaattaatggtctttttactgaa
gaaagaatgaaatttgagtatcaccgccccatgaaggctattgctctagacccaggttat
gctaacaaatcatccagaagatttgtcactggtggtttagctggtcaattgtattttaat
gtcaagaagtggataggctaccgtgatcaggttctgcattctggtgaaggtccaattcat
gctgtgaagtggagagctagtctcgttgcatgggctaatgatgcaggagtgaaagtttat
gatgctgccaatgaccagcgcataacttttattgaaagacctcgtggaagtccacaccct
gagcatctgctacctcacttagtttggcaggatgatacgcttttggtgattgggtgggga
acttctgtgaaaattgcagtaataagaacaaatcagaacaagggtgtgaatggcacatac
aaacatatcccaatgtccagcctgaaccaggtggatattgtggcatcttttcaaaccagc
tatttcatttcaggaattgctccatttggtgatactttggttattcttgcttatattacg
ggagaagagaaagagaaggatttcagtagtaccgttccctcacgtcagggaaatgctcag
agaccagaggtccgagttgtaacatggactaatgatgagcttgcaactgatgcacttcct
gtccatggttttgagcattataaagccaaagactattcccttgcacatgctccattctct
ggtagcagctatgcaggtggacagtgggctgctggtgatgaacctttgtactatattgtg
tccccaaaggatgtagttattgcaaagcctaggttagtgatagttagttcccatttgatt
tattgggatgcagaagaccacattaattggcttcttcagcatggatgtcatgagaaagcc
ttagaagctgttgaagctagtaaaggtcggagtgagctagttgatgaggtaggttcaagg
tatcttgaccatctgattgtggaaaggcagtatgctgaagctgcatctctgtgtccaaaa
ctgttgagaggatctgcctctgcatgggaaagatgggttttccattttgcccatcttcgt
cagcttcctgtattggttccttatatcccaatagaaaatccaaggttgcgtgatactgct
tatgaggtagctcttgtggcattggcaacaaacccctctttccacaaggatctcttagca
actgtcaaatcttggcctcctggcatttattctacatccccagttatatcagctatagaa
cctcagcttagcacatcatcaatgactggtccactcaaggaggcactggcagaattatat
gttattgatggacatcatgataaggccttttcactgtatgctgatcttatgaagcctgat
ctatttgacttcattgaaaagcataatttgcatgatgctgtttctgaaaaggttgcccaa
cttatgatgatagactgtaagcgcgcaataccgttgttgcttcaacacagagacttaata
ccgcctccagaagttgtgtcacaactcatggccgcaggaaatgagggtgattctcgatac
ttgatgcatctgtatcttcatgcactctttgaaactaatcctcatgctgggagggattac
catgatctccaggtcgaactttatgctgagtatgatccaaagatgctgcttccttttctt
aggagtagccagcattatacacttgagaaggcgtatgatatctgtgtcaaaagaaatcta
ttgaaagaacaagttttcatactaggaaggatggggaattctaagcaagcccttgcagtt
atcataaataagctaggagatattgaagaggctatagaatttgtgaatgatcagcatgat
gatgaactatgggatgaattgattaggcagtgtcttaataaagctgaaatggttggagta
ctattagagcacactgtggggaaccttgatcctctttatatagtaaatatgctgcccaat
ggcttggagatacctcgtttgagggatcgcttggtcaaaattatcacagactacaggaca
gaaacttcgcttaggcacggttgtaatgatatactcaaggctgattgtgttaaccttttg
attaaatactacaaagaagcaaagcgtggtattcacttgagtgatgaagtagacgaagct
cgctccaaaaggggtgaacagagggcttcaaatctggttgaccgaactcttagcataaaa
tccatggaggtcaaatcaaaaactaggggaggtggaaggtgttgcatatgctttgatcca
ttctccatacagagtatatcgatcattgcattcttttgttgtcatgcctatcacttgact
tgccttatggagtccaccaactctgtgagtagcaaaaaagaggcagccgccccttcccaa
ggtgcttcctcatattatgaatatgataatggtgaggtagatgaggatgaggatgaggat
gaagctacctcatctggtgcccctcggatgcgttgtatcttgtgcactactgctgcaggt
tga
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