KEGG   Ipomoea nil (Japanese morning glory): 109193160
Entry
109193160         CDS       T04663                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03020  RNA polymerase
ini03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109193160
  09124 Replication and repair
   03420 Nucleotide excision repair
    109193160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109193160
   03400 DNA repair and recombination proteins [BR:ini03400]
    109193160
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109193160
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109193160
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 109193160
NCBI-ProteinID: XP_019199551
LinkDB
Position
Un
AA seq 138 aa
MSVEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQIQQMSEDPTNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYKLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtcagtagaagaggaggagaacgctgcggagcttaaaatcggagatgaatttctcaag
gcgaagtgtctgatgaactgtgaggtttctttgattcttgaacacaagtatgagcagatt
cagcagatgtctgaggatccaacaaatcaagtttcccaagtgtttgagaagtcacttcaa
tacgtgaagcgtttcagccggtacaagaaccctgatgctgtgagacaagttcgagaaatc
ctgagtagatataagcttgctgaattcgagctttgtgttctgggaaacctttgcccagaa
accgttgaggaagcgattgccatggtcccatccattaagaacagagggcgtgcactggac
gatgaggcaattgagaagatgctaaatgacctctcattgataaagaaatttgagtag

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