Ipomoea nil (Japanese morning glory): 109193169
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Entry
109193169 CDS
T04663
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109193169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109193169
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109193169
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109193169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109193169
NCBI-ProteinID:
XP_019199562
LinkDB
All DBs
Position
Un
AA seq
281 aa
AA seq
DB search
MGVQEDVLDANPIKIREVWADNLESEFQLISHLIDEYPYISMDTEFPGVVFKPESRRRGP
FSASDRSADSYRLLKSNVDALNLIQLGLTLSDGSGNLPVLGSDGHRFIWQFNFSDFDVQR
DLYAPDSVELLRRQGIDFDKNRDCGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYL
VKILTRRSLPGDLEDFLEILKIFFGDRVYDIKHLMKFCQSLYGGLDRLARTLAVDRVVGK
CHQAGSDSLLTWHTFQKMRDVYFVNEGPEKHAGVLYGLEVF
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgggggtacaagaagatgttttggacgcaaatcccattaagattcgggaagtttgggcg
gataatctggaatcggagttccagctcatcagccacctcatcgacgagtatccgtacatc
tccatggatacggagtttcctggggttgttttcaagccggagagtcgccggcgagggcct
ttctcggcttccgatcgctctgcggattcctaccggttgctcaagtcaaacgtggatgct
ctgaatctgattcagttggggttgactttgtcggacggtagcggaaacctccccgtgctc
ggatctgacggccaccgcttcatctggcagttcaatttctccgactttgacgtgcagcgt
gacctctacgcgccggattccgtcgagttgctccgccgtcagggaatcgacttcgacaag
aaccgggactgcggggttgactcggcccggttcgccgagttgatgatgtcgtccggcctg
gtctgtaacgagtccgtcagctgggtcacgttccacagcgcgtacgatttcggctacctg
gtcaagatcctcacgcgccgctccttgcccggagatctggaagatttcttggaaattctc
aagatcttcttcggggatagggtttatgacatcaagcacctcatgaagttctgccagagt
ctctatggcgggctagaccggttggccagaacgctggccgtggaccgggtggtcggaaaa
tgccatcaggccggttcagatagcctgctgacatggcacacgtttcaaaaaatgagggat
gtgtactttgtaaatgaaggaccggaaaaacatgccggagtattgtatggactagaagtt
ttttaa
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