KEGG   Ipomoea nil (Japanese morning glory): 109193179
Entry
109193179         CDS       T04663                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ini03400]
    109193179
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    109193179
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 DEAD Prok-RING_4 ResIII zf-C3HC4_4 zf-RING_5 zf-RING_4 zf-ANAPC11 MEIOC
Other DBs
NCBI-GeneID: 109193179
NCBI-ProteinID: XP_019199572
LinkDB
Position
Un
AA seq 1040 aa
MGNKVPEELVSTVRSIVGDEYTEMDIIRALHMANNDATAAINIIFDTPGFKKLEFRKTPE
PPNLNSSSGTQCLGSTTRRSSSEGEKCERSTISANGSQLKSENRESNNGCISDADGCEMG
SEWWFVGTSEVSGLSTCKGRSLKPGDEVYFTFPSEKKLNSPSLAKFGRGRQVVACSEIVR
FSSKALGEIGRIPNEWARCLLPLVREKKVRVEGYCKSAPNVLGIMDTVVLSVSVYINSSM
FRKSHKTLLKVATNNSTDESIVYPLPTLFRLLRLTPFQKAEFTPGDLYMRKRRLIEENSS
GIHTSPLHVNKFKKLVTNEGEADGDESISDTDLENIVGFADNSELEEMEPPSTLQCELRS
YQKQALHWMTQLEQVHSVNDAKTTLHPCWEAYRLADKRDLVIYLNAFSGDATTEFPSTLQ
MARGGILADSMGLGKTIMTIALLLSCTERGGSPGSQPTSLPSHENGDTSDISDQSPTPSK
KAARFPGLEKFLKQKPTLKSGGNLIVCPMTLLGQWKAEIEMHACPGTLSLYLHYGQSRSK
DPKFIAQSDVVLTTYGVLASEFSSENAEENGGLFSVRWSRVVLDEAHTIKSSKSQISIAA
SALIAERRWCLTGTPIQNNIEDVYSLLRFLRIEPWGSWAWWNQLVQKPFEEGDERGLRLV
QSILRPIMLRRTKSSTDREGRPILVLPPADIQVIYCEFTEAEKDFYEALFKRSKVKFDQF
VEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQEFSDLNKLAKRFLKGGQKTGENH
VKDVPTRAYIQEVVEELQKGEQGECPICLEACEDAVLTPCAHRLCRECLLASWRSSASGF
CPVCRKTVSKQELITAPTDSRFQIDVEKNWVESSKVTALLHELEQLRAVNSKSIVFSQWT
AFLDLLQIALARNDIPFLRLDGTLNQQQREKVIKKFSEEDSVLVLLMSLKAGGVGINLTA
ASNAFVLDPWWNPAVEEQAVMRVHRIGQTKRVAIKRFIVKGTVEERMEAVQARKQRMISG
ALTDQEVRTARIEELKMFFT
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgggtaacaaagtacctgaagaacttgtttctacggtccggtccatcgtcggcgatgag
tacaccgagatggatataattcgagctcttcatatggcgaataacgatgcaacggccgca
attaacatcatttttgacacccctggtttcaagaagttagaatttaggaaaacccctgag
ccacccaatcttaattcaagctcagggacacaatgtctaggttcaactacaaggagaagt
agtagtgagggtgagaaatgtgagcgtagtacgatttcagctaatggttcacagctgaag
agtgagaaccgggagagtaataatgggtgcataagcgatgctgatgggtgtgagatgggg
agtgagtggtggtttgtgggtactagtgaggtttccggcctctcaacctgtaaagggaga
agtttgaagcccggagatgaagtatatttcacttttccttctgagaagaaattgaattca
ccatccttggcgaaatttggccgaggtcgacaggtggttgcttgttctgaaattgtgcgg
ttctcttcaaaggcacttggagagattggaagaattccaaacgaatgggctcgatgtctc
ttgccacttgtgagggaaaagaaggttagggttgaaggatattgtaaatctgctcctaac
gtattggggattatggacacggtagttttgtcagtcagtgtgtatattaacagttccatg
ttccgtaaaagccataagaccctcctcaaggtggctaccaacaattccacagatgaatca
attgtttatccccttccaacattgtttcgattgctacgacttacgcctttccagaaggca
gagtttactccaggcgatctttacatgaggaagcgtcgtttgattgaagagaacagttct
ggcattcatacttcaccattgcatgttaataaattcaaaaaattggtcacaaatgaaggt
gaagctgacggtgatgagtcgatctctgatactgatctggaaaatattgtgggttttgct
gacaactctgagttagaggaaatggaacctcctagtacacttcagtgtgaacttcgttct
tatcagaagcaggctcttcactggatgactcaacttgagcaggttcacagtgtgaatgat
gcaaaaacaactttgcatccgtgttgggaagcatatcgccttgcagacaagagagatcta
gtgatctacttgaatgcattttctggggatgcaacaacagaatttccaagcacccttcaa
atggccaggggtggaattttggcagattccatggggcttggaaagactattatgactata
gctctccttctgagttgtactgaaagaggtggatcaccaggaagccagccaacaagcctg
ccttcccatgaaaatggtgataccagtgatatctcagatcaatctccaactccttcaaag
aaagcagcaagatttcctggtcttgagaagtttttgaaacaaaaaccaacattaaaatcc
ggtggcaatctgattgtatgccctatgacacttttaggccagtggaaggcagagattgaa
atgcatgcatgcccaggcactttaagtctttatcttcattatggacaaagtagatcaaag
gatccaaagtttattgctcaaagcgatgttgtactaacaacatatggagttttggcatca
gaattttctagtgagaatgctgaggagaatggggggcttttctcagttagatggtctaga
gttgtgcttgatgaggctcataccataaaatcttctaaaagccaaatttctatagctgca
tctgctcttattgctgagcgtcggtggtgtctaactggtacgcccatccagaacaacatt
gaggatgtttacagcctcctaaggtttttgaggattgaaccatggggaagctgggcatgg
tggaaccaacttgttcagaaaccctttgaggagggagatgagagaggattgaggttggtt
caatcaattcttagacctataatgttaagaagaacaaagtctagcactgatcgagaaggc
aggccaattttagttcttccaccagcagacattcaagtaatatactgtgaattcactgaa
gcagaaaaggacttttatgaggccttgttcaaacgatcaaaggtgaagttcgatcagttt
gttgagcaggggcgggttctccataattatgcttctattttagagttgcttttacgactt
cgccaatgttgtgatcatccatttcttgtgttgagtcgaggtgatactcaagaattctca
gatctgaataagcttgctaaacgtttccttaagggtggtcagaagactggggaaaaccat
gttaaagatgttcccactcgtgcttatattcaagaggttgtggaagagttgcagaaggga
gaacaaggagagtgcccaatatgtctggaagcttgtgaagatgctgtgttgactccatgc
gcccatcgattatgtcgagagtgcctcttagcaagttggagaagttctgcatctggtttt
tgtcctgtttgtagaaagactgtcagcaagcaggaactgatcacagcaccaacagatagc
cgtttccagatagatgttgaaaagaattgggtggaatcatcgaaagttactgcattgttg
catgaactagaacaattacgtgctgtaaactccaaaagcattgtttttagtcagtggact
gcctttttggacctcttgcaaattgctcttgctcggaatgatatcccttttcttcgcctt
gatgggactctaaaccagcaacagcgtgagaaagtaataaaaaaattttcagaagaagat
agtgttttggtgttgttaatgtcattgaaggctggtggtgtcggaataaacctgacggca
gcatccaatgcttttgtcttggatccatggtggaatccggctgtggaggaacaagctgtg
atgcgtgtccatcgtattggacaaacaaaaagagttgcaatcaaacggttcattgtgaag
ggaacagttgaggagagaatggaggcagtgcaagccaggaaacagcgtatgatttctggc
gccctaacagaccaagaagtgcgaacagcacgaattgaggaacttaagatgtttttcaca
tag

DBGET integrated database retrieval system