KEGG   Ipomoea nil (Japanese morning glory): 109193338
Entry
109193338         CDS       T04663                                 
Name
(RefSeq) protein EXPORTIN 1A
  KO
K14290  exportin-1
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03008  Ribosome biogenesis in eukaryotes
ini03013  Nucleocytoplasmic transport
ini03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109193338
   03008 Ribosome biogenesis in eukaryotes
    109193338
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109193338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ini03019]
    109193338
   03009 Ribosome biogenesis [BR:ini03009]
    109193338
   03016 Transfer RNA biogenesis [BR:ini03016]
    109193338
   03036 Chromosome and associated proteins [BR:ini03036]
    109193338
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109193338
Ribosome biogenesis [BR:ini03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    109193338
  Pre-60S particles
    109193338
Transfer RNA biogenesis [BR:ini03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    109193338
Chromosome and associated proteins [BR:ini03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     109193338
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N Adaptin_N mTOR_dom TPR_TNPO3_IPO13_2nd TTC3_9th Gpr1_Fun34_YaaH
Other DBs
NCBI-GeneID: 109193338
NCBI-ProteinID: XP_019199744
LinkDB
Position
Un
AA seq 1076 aa
MAAEKLRDLSQPIDVALLDATVNAFYGTGSKEERAAADHILRDLQNNPDMWLQVVHVLSS
TQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISELIVKLSSDEAFLRRERLYLNK
LNVILVQILKHEWPTRWRSFIPDLVAAARTSETICENCMAILKLLSEEVFDFSRGEMTQL
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPVHAYRNLTLQCLTEVAALSFGDFYNMQYVKMYTIFMAQLQTILPPNTNIPEAYA
QGTNEDQAFIQNLALFFTSFFKSHIRVLENSQENINALLMGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFEAHHNVDNPAMTAALMGLQMPMLPGMADGLGAQQMQRRQLYAGPMSKL
RLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LRKLSKQLDGEDWSWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIIQVGENEPFVSELLTTLPTTIADLEPHQIHSFYESVGQMIQAESDAQKRDEYLQR
LMQLPNQKWAEIIGQARVSVDYLKDQDVIRGVLNILQTNTSAASSLGTYFLSQITLIFLD
MLNVYRMYSELISTSIAQGGPFASRTSVVKLLRSVKRETLKLIETFLDKAEDQPHIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKSTMIDDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIRLSTEQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFLTIEQETFAVLTDTFHKPGFKLHVLVLQHLFCVVESGM
LTEPLWDASTVTYSYPNNAVFVREYTIKLLSTSFPNMTSSEVTQFVSALFESTNDLSVFK
NNIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq 3231 nt   +upstreamnt  +downstreamnt
atggcggcggagaagcttagggatttgagtcagccgattgatgtcgcattgcttgacgcc
actgtcaatgctttctatggcactggatctaaggaggagagggctgctgctgatcatatt
ttgcgtgatttgcaaaataacccagacatgtggcttcaagtggttcacgtcctatccagc
acacaaaacttgaataccaaattttttgctttacaggttctagaaggtgtcataaagtat
agatggaatgctttgcctgttgagcaacgagatgggatgaaaaattacatctctgaactt
attgtgaagctttcaagtgatgaagcatttcttcggcgagaaagattatatctgaacaaa
ttaaatgttattttggttcagattttgaagcacgagtggccaacaagatggcgaagcttc
attcctgatttagttgctgcggcaaggacaagtgaaactatttgtgagaattgcatggct
atattgaagcttcttagtgaggaggtttttgatttctcaaggggtgaaatgactcagctg
aagatcaaagagctaaaacagtcactaaacagtgagtttcaactcattcatgagctatgt
ctatatgtgctctctgcatctcaaagaactgagcttatcagggctactcttgctacatta
catgctttcctctcatggattcctttgggttatatttttgaatctccactgctggaaaca
ctacttaaatttttccctgtccatgcttatcgtaaccttacacttcagtgcctgacagag
gttgctgcactcagttttggagatttttacaatatgcagtatgtgaagatgtacaccatc
ttcatggcccagctgcagaccattcttccacccaatacaaacatccctgaggcttatgca
caaggcaccaatgaagatcaggcatttattcagaatttggcattatttttcacctcgttc
tttaagtcccatattcgggtgttggagaattcccaggaaaatataaatgcactactgatg
ggtcttgaatatcttattaacatctcatatgtggatgacactgaggttttcaaggtctgc
ttggattattggaattctttagttctggagctgtttgaagcacatcataatgtagacaac
cctgcaatgactgcagctctcatggggctacagatgccaatgcttcctggtatggctgat
ggtttgggtgcacaacagatgcaaaggcgtcaactttatgctggtccaatgtctaagttg
aggttactaatgatatgtcgcatggcaaagcctgaagaggttcttattgtggaagatgaa
aatgggaatattgtccgtgaaacaatgaaggataatgatgttcttgtgcaatataagatc
atgagggaaacactaatctacctgtcacatcttgaccatgaagatacagaaaagcagatg
cttagaaaacttagcaagcaactagatggtgaggattggtcatggaacaatcttaataca
ttatgctgggcaattggatccatatctgggtctatgatggaggagcaagaaaatagattt
cttgtgatggtgattcgtgacttgttgaatctctgtgaaattaccaagggcaaggacaac
aaagcagtcattgcaagtaatataatgtatgtggttgggcaatatccacgttttttaagg
gcccattggaagtttttgaagactgttgtgaacaagttatttgagttcatgcatgaaact
catcctggcgttcaggacatggcctgtgacacatttttgaagattgttcagaaatgcaaa
cgcaaatttgttattatccaggttggagagaatgagccatttgtatcggaactcttaaca
actcttccaacaactattgcagatctagagccacatcagatccattcattttatgaatct
gttggtcaaatgattcaagctgaatctgacgctcagaagagggatgaatacttgcagagg
ttgatgcaacttcctaatcagaaatgggctgagattatagggcaggcacgcgtaagtgta
gattacttgaaagatcaagatgttattagaggtgtgctaaacattttacagacaaatact
agtgctgccagctcgcttgggacatacttcttatcacagattactcttatctttttggac
atgcttaatgtgtatagaatgtacagtgagcttatatcaactagcattgcacaaggagga
ccctttgcatctcgaacctccgttgtaaaactcttgcgttcggtgaagagggaaactctg
aagctcattgagacatttttggataaggcagaggatcaaccacatataggaaagcaattt
gtgcccccaatgatggacccagttctgggtgactacgcccggaatgttcctgatgctaga
gaatctgaagttctctctctttttgcaactattataaacaagtataagagcacaatgata
gatgatgttccacgcatatttgaagctgtatttcagtgtactttggagatgattacaaaa
aattttgaagattatcctgaacatcggctcaagttcttctccttactacgtgcaattgct
actcattgtttccctgctttgatacggctgtcaactgagcaactcaagctggtgatggat
tccatcatttgggcattcaggcacactgaaaggaatattgcagaaaccggtcttaacctc
ttactggagatgcttaaaaactttcaggcatcagagttctgtaaccaattctataggaca
tactttttgaccattgagcaagaaacctttgctgttctgacagatacatttcacaaacct
ggcttcaaattgcacgtgttggtacttcagcatttattctgtgtggtcgagtctggaatg
ttgactgagccactatgggatgcatcaacagtaacttattcttatcctaataatgcagtg
tttgtacgggagtacaccattaaacttcttagtacttccttccccaacatgacttcttct
gaggttacccaatttgttagtgcactgtttgaatcaacaaatgacctctcagtattcaag
aataacatacgagacttcctcgtgcaatcaaaagagttctcagctcaggataacaaggat
ctgtatgctgaggaagctgctgcacagcgggaaagagaacgacaacggatgctttccatt
cctgggctaattgctcccaatgagatacaggatgagatggtggactcgtaa

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