Ipomoea nil (Japanese morning glory): 109193774
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Entry
109193774 CDS
T04663
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109193774
Transcription machinery [BR:
ini03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109193774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
HTH_11
Motif
Other DBs
NCBI-GeneID:
109193774
NCBI-ProteinID:
XP_019200128
LinkDB
All DBs
Position
Un
AA seq
494 aa
AA seq
DB search
MGVVTVSSSAARSPLGLSTRFSSRLCALKRPLVLSFKANKPKNAAALVYPDEPTSLSLET
SKESKKRVGRAKKRSDRIHAVSTGEASPSTLDLDYNDVAAKLEKLYIHSPEPTTSRIGSE
GCIVKRSCQRKKTKRLSLDKRVALRNMKGDEIVASSHERKRKEETEEEKINKLVREYSVG
TDLVSMDWKKMKIPAVLASSEHAWLFKLMQPMKVILQVKEHLQNDLGREPSGVEIAEATN
VDIVVLRKILEAGRAARNKLIKHNLRLVLFVIKKYFQDFANGPKFQDLCQAGVKGLITSI
DRFEPKRRLQLSTYGLFWIRHAVIRSITLSSFIKVSFGLESVRAEIQRARLELLFELQRM
PTDEEITGRVGISTDRYHEVMKASKPVSSLHARNRVTQEELINGITDLDGVEGDKRQQPA
LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL
KHPARVDYLRRYIF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctctgctgcaaggagtcctttgggattgagcacgaga
ttttcctctcgtttatgtgcgcttaaaagaccgttagtactgtcattcaaagccaataaa
ccgaaaaatgctgctgctttggtttatcctgatgaacctacatcgttgtctctagagaca
tcgaaagagagtaaaaagagagtggggcgagctaaaaagcgttcagataggattcatgct
gtctctacgggtgaagcctctccgagtactctagatttggattacaatgatgttgctgcc
aaactcgagaaattatacatccatagtccagaacctactacttctcgtataggttctgaa
ggctgtatagtcaagagaagttgtcaaaggaagaaaacgaaacggttgagtcttgataag
agggttgctcttagaaacatgaagggagacgaaatagtcgcttcttcccacgaaaggaag
cgtaaggaggaaacagaagaagaaaaaatcaataaactcgttagagaatattcggttggc
acagatttagtgagcatggactggaagaaaatgaaaatcccagcagttcttgcttcatct
gagcatgcctggctctttaagttgatgcagcctatgaaggtaatccttcaagttaaggaa
cacttacaaaacgatctggggcgagaaccatctggtgttgaaatagcagaagcaacaaat
gtggatattgttgtactaaggaaaatattggaagctggtcgagcagcacgaaacaaattg
atcaagcacaacctacgactggttttgtttgtcatcaaaaaatattttcaagattttgca
aacggtccaaagttccaagacctatgtcaagcgggcgtgaagggccttattacatccatt
gatcgatttgaaccaaaaaggaggttacagctctcgacatacggtctcttttggattaga
catgcagttatacgctccataactctttcgagcttcattaaagtgtccttcgggcttgag
tcggtaagagctgaaatccagagggcgagattagaattgttgtttgaacttcagaggatg
ccaacagatgaagagataacgggacgagtaggaatctccactgacagataccacgaagtg
atgaaagcatcgaaacccgtttcctctctccatgcaaggaaccgcgtgacacaagaggag
cttatcaatggaattactgatctcgatggtgttgaaggcgataagaggcagcaacccgct
cttctaaggcttgctcttgacgatgtgcttgattctctgaaaccgaaagaaagcctggtg
atcagacagagatatgggctcgatggcaaaggcgataggacactgggagaaattgcggga
aatctaaacatttcgagagagatggtgaggaaacacgaggtgaaggctctcatgaagctc
aagcatccagcccgagtggattatcttcgcagatacattttctaa
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