KEGG   Ipomoea nil (Japanese morning glory): 109193822
Entry
109193822         CDS       T04663                                 
Name
(RefSeq) U6 snRNA phosphodiesterase
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ini03041]
    109193822
Spliceosome [BR:ini03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109193822
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2
Other DBs
NCBI-GeneID: 109193822
NCBI-ProteinID: XP_019200192
LinkDB
Position
Un
AA seq 288 aa
MDALKASYGDVSSDSDSESDPTLPPPSTSTSIAAETFTPLPPPPVSLLDTPSSLGSFDYL
QSSQVNRVRSFPHVEGNYALHVYIPVHIQSASRKELAQFLERVTALVPSLNVVDVDVPLS
SLVRDNSKLEQVALGREFHISLGRTVPVRVHQINSIVSMLRQRLQSQKRYWINFDKWEIF
VNDDCTRTFMSLEVVKGGLFEITKQIQAVNEVYRLHNLPEFYKDPRPHISIAWALGDISD
TLKRMVEEEMKRYLVGSSQQKPIFTTKFSSILCKIGNKSYEICKFHGE
NT seq 867 nt   +upstreamnt  +downstreamnt
atggatgccttgaaagcctcatacggcgacgtttcttctgattccgactcagaatccgat
cccactcttcctccgccctccacctccacttccatcgccgccgagacattcacgcctctg
ccgccgcctccggtctctctacttgacacgcccagttcattgggttcgtttgattacttg
caaagcagtcaagtcaatcgagttagaagcttccctcatgtagaaggcaattacgctctt
catgtttacattccagttcatatacaatctgcatcgaggaaggagttggctcagtttttg
gaaagggtcacggctcttgttcccagtcttaatgttgttgatgttgatgtacctttaagt
agtttggtgagagacaacagtaagcttgagcaagttgccttaggtagggaatttcatata
agtttgggaaggactgttcccgttcgtgtacaccagatcaactcaatagtctcaatgctt
cgtcagaggctgcaatctcagaagaggtattggataaatttcgacaaatgggagattttt
gtgaatgatgattgcactcgcacttttatgtcgttggaagttgtcaaaggaggcttattt
gagataacaaaacagattcaagctgttaatgaggtgtataggcttcataatcttcctgaa
ttttacaaggatccacgcccccatatatccatagcttgggcattaggtgacatcagtgat
acattgaagaggatggtagaagaagagatgaagagatatcttgttgggagttcacaacag
aagcccatttttacaaccaaatttagtagcattttgtgtaagattggcaataaaagttat
gagatatgcaaatttcatggagagtaa

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