Ipomoea nil (Japanese morning glory): 109193993
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Entry
109193993 CDS
T04663
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109193993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109193993
Spliceosome [BR:
ini03041
]
Complex A
Other components
Complex A specific factors
109193993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
RRM_5
KH_PNO1_2nd
RRM_7
RRM_10
OB_RNB
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
109193993
NCBI-ProteinID:
XP_019200372
LinkDB
All DBs
Position
Un
AA seq
854 aa
AA seq
DB search
MDTLQSNYMDSQSEPGAASETQPQHSSRGLGSYDQSSFQNYSDSSSYYQNYSDSYPQNPS
QTLDQSQSHSVAAYPQEQNQPGKTLDSDRHNTHGSSEQQMDNNSAQNHEQTTPQDGAPKV
ELRKPLLSENGLTNTHSGTDKDQSGGEEETTSRRRRRSRWDPPPSESSNDGTGTGGDGSG
TGTGTGRKRKSRWADDEPKPLIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRKLQSGLP
LDDRPEGARSPSPEPIYDNMGIRINTREYRAREKLNRERQEIISQIIKKNPAFKPPADYR
PPKLQKKLYIPVKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSMKEGRLQQKR
DMKPDPSENEDLHVLVEAETPESLEAAAAMVEKLLQPVDEVLNEHKRQQLRELAALNGTI
RDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKSTTGKKMDDEYQ
NFLAELGGTIPESSTKQSSGTLALGAGSSSGNPPWATGSSTGGVGASSHPGLGSTVIKPK
EYDETNLYIGYLPPTLDDDGLINLFSPFGTIVMAKVIKDRVTGQSKGYGFVKYDDVQQAN
SAIASMNGHHLDGRTIAVRVAGKPPQPTVPPGPPAPAIPTYPPPNQAVGAYPSQQYTAGG
PMGNAPPPSYTGAPVPWGPPPPYPPYPLPPPPPGSAVYSPVPGQPVPPYGMQYPPPPLPT
ATTGASTQTVPSNEAQQSYSTSGSQQQSYPPGVQSQSSAPVQSVPTYAYGNSVTQMPSNA
QAAYPTSSYSYPAYYGVAPPPPPGPVPQSTGDYSQSVGNVPWAPNPPPPAPVQSADKSSY
GADAEYEKFMTEMK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcttcagtccaattacatggattcccaatctgagccgggagctgcttctgaa
actcaacctcaacattcgtcccgagggctgggttcgtacgatcagtcctcgtttcagaat
tattctgattcttcatcatactaccaaaattactcagattcgtaccctcaaaacccttct
caaaccctagatcagtcccaatcgcactctgttgctgcgtatcctcaggagcaaaatcag
cctggaaaaaccctagattcggatcgccacaacactcacggcagctccgagcagcagatg
gataataattcggcccagaaccacgagcaaacgacgcctcaggatggcgctccgaaggtc
gagctccgcaaacccttgctgtcggagaacgggctcacgaatactcacagtggtaccgat
aaggaccagtctggcggcgaagaggaaactaccagcaggaggcgtcgcaggagccggtgg
gaccctcctcctagcgagtcgagcaacgatggcactggtactggcggtgatgggagcggg
acagggactggaaccggaaggaaaaggaagtcacggtgggcggatgatgagcctaaacct
ctgattcagctgccggattttatgaaggatttcacgggaggtattgaatttgaccctgag
attcaggctttaaacagtaggttacttgagattagtcggaaattgcaatctggtttgcct
ttagacgataggcctgaaggtgctcgctcaccctctcctgaacctatctatgataacatg
gggatcagaataaatactagggagtaccgagcccgagaaaaactgaatagagaaagacaa
gagattatttcacaaataataaagaaaaatccagcatttaagcctccagctgattataga
cctccaaaactccaaaagaagctatacattcctgttaaggagtacccaggttataacttc
attggacttatcattggaccaagagggaatactcagaaaaggatggaaaaggagacagga
gccaaaattgtaatccgaggaaaaggttcaatgaaagaaggcaggttgcagcagaaaaga
gatatgaaacctgatccttctgagaatgaggatttacatgtgttggtcgaagctgagacc
ccagagtcacttgaagctgctgcagccatggttgaaaagctcttgcagccggttgatgaa
gtccttaatgagcataagaggcaacagcttagggaacttgctgcattaaatggaactatt
agggatgaggaatattgtagattatgtggtgaacctggccatagacaatatgcatgtcct
tcccgtacttccacctttaagagtgatgttctgtgtaaaatttgtggtgatggtgggcat
cccactattgattgcccagtaaaaagtacaacaggcaagaaaatggatgatgagtatcaa
aacttcttggcagagttggggggaaccattcctgaatcttcaactaagcaaagctctgga
acactagctcttggtgctggtagttcaagcgggaatcccccttgggccactggtagcagc
actggtggggttggggcctcttctcatcctggtttagggtcaactgtgatcaagcctaag
gagtatgatgagacaaacttgtatattgggtatttgccgcctactctagatgatgatggc
ttgatcaatttgttctctccttttggcaccattgtgatggccaaggttataaaagatcgt
gtcactggtcagtctaaaggttatggttttgtcaagtatgatgatgttcagcaggccaat
agtgcaattgctagcatgaatggccatcatctggatggtagaactattgctgtgagagtt
gctggtaagccccctcagcctactgtccctccaggccctccagctcctgctattcctaca
tatcctcctcctaatcaagctgtgggtgcctacccttctcagcagtatactgcaggtgga
ccaatggggaatgcaccacctcccagttacactggtgctccagttccatggggacctcct
cctccttatcccccctacccacttccacctccacctcctggttcagctgtgtattctcca
gttcctggtcaacctgttcctccttatggaatgcaataccctcctccaccattacctact
gcaaccactggtgcctctactcaaacagttccctctaatgaagcacaacaaagttacagc
acttctggtagtcagcagcaaagttacccccctggagttcaatctcagagtagtgcacct
gttcagtctgtgcccacatatgcctatggcaattctgtcactcaaatgccatcaaatgcc
caagctgcatatccaacatcttcatacagctaccccgcttattatggtgttgcacctcct
cctcctcctgggcctgtgccacagtcaactggcgactattcacagagtgtgggcaatgtt
ccatgggctccaaatcctccaccccctgctcctgtgcaatctgcagacaagtcatcctat
ggtgcagatgcagaatatgaaaaattcatgacagagatgaaatga
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