Ipomoea nil (Japanese morning glory): 109194029
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Entry
109194029 CDS
T04663
Symbol
InWDR1
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109194029 (InWDR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109194029 (InWDR1)
03036 Chromosome and associated proteins [BR:
ini03036
]
109194029 (InWDR1)
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109194029 (InWDR1)
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
109194029 (InWDR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR41
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
MIOS_WD40
EIF3I
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
109194029
NCBI-ProteinID:
XP_019200425
UniProt:
Q1JUZ7
LinkDB
All DBs
Position
Un
AA seq
343 aa
AA seq
DB search
MENSTQGSNLRSENSVTYESPYPIFAMAVSSFAAAHHGLRRRSVAVGSFLEEYKNRVEIL
SFEEDTVTLKTNPGLAFDHPYPPTKLMFHPNPTASMKSADLLVSSGDYLRLWEVREASIE
PVSTLNNSKTSEYCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV
YDIAWGEAGVFSSVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
LMDSNKVVILDIRSPAMPVAELERHNASVNAIAWAPQSSRHISSAGDDGQALIWELPTVA
GPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFSNKLQMLKV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcaacccaaggatcgaatctcagatccgagaattccgtgacctatgagtct
ccctaccccattttcgccatggccgtgtcctccttcgccgccgcccaccatggcctccgg
cgacgcagcgtcgccgtcggcagcttcctcgaagagtacaaaaaccgggtcgaaatcctc
tccttcgaagaagataccgtcactctgaaaaccaacccggggctagccttcgatcaccct
taccctcccacgaagctcatgttccatcctaatcccacggcgtcaatgaagtccgccgat
ctcctagtgtcctccggcgactacctccgtctctgggaggttcgagaagcttccattgag
cccgtttcgaccctcaacaatagcaaaaccagtgaatactgcgccccattgacctccttc
gattggaacgaggtggagccgcggcgaatcggaacttcaagtattgataccacctgtacc
atctgggatatcgagaagggcgttgtggaaacccaattgatcgcccacgataaagaggtt
tacgacatagcctggggggaagccggggttttctcttcggtttcggctgacgggtcggtt
cggatcttcgatctgagagacaaagaacactccacaatcatatacgagagcccccaaccc
gacaccccattgctcaggctggcttggaacaagcaagatttaaggtacatggcgacaata
ttaatggacagtaacaaagttgtaatcttggacatcaggtcacctgcaatgccggtggct
gagctggagaggcacaatgctagtgtgaacgccattgcttgggctcctcagagctccagg
cacatctcttctgccggagatgatggccaggcgcttatctgggaattgcccacagttgca
ggcccaaatgggattgaccccatgtcaatgtactcagctggggctgagattaaccagctt
caatggtctgctgctcagcctgactggattgccattgcgttttctaacaagcttcagatg
ctaaaagtgtaa
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integrated database retrieval system
