Intestinibacillus sp. NTUH-41-i26: RX717_00895
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Entry
RX717_00895 CDS
T09461
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
int
Intestinibacillus sp. NTUH-41-i26
Brite
KEGG Orthology (KO) [BR:
int00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
int03000
]
RX717_00895
Transcription factors [BR:
int03000
]
Prokaryotic type
Helix-turn-helix
Other families
RX717_00895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
PAS_8
PAS
GAF
PAS_9
AAA_2
HTH_30
HTH_11
HTH_23
HTH_29
HTH_28
AAA
HTH_50
HTH_1
HTH_7
HTH_17
HTH_22
AAA_7
HTH_20
MCM
HVO_A0261_N
T26-6p_Ig-like_dom_2
Motif
Other DBs
NCBI-ProteinID:
WOC75584
LinkDB
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Position
190597..192588
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AA seq
663 aa
AA seq
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MIAEAKREQMERARYQFFHSGAEDYSVFPKVVYDSWKRSLAYGLDPEKQSVKRLAPEELE
ARRRKNAVLMEVATSFMEFLHTLVKGSGFVLLLSDSDGYILKLIGDKDAVADIQSKENPL
VEGACRHESVFGTGGIGTPMAIRKPVQLASYEMFYPSEHEFTGIGAPLIDADGRLWGAIC
MSGAWNQTHPHTLGLVAAASYAIMRQFSLQRLYNRLAAAENQLQTIISTINQGVFLLDSG
YTIVKTNDTALQILGYTKDELLRQSILEIMPSFDFFKMKKNVYDRDLTVQGKYGTIRAFV
TIQMVQNAASSDGSGLLITFRQSPEVRKFVTKYIGATASFNFDDIIGQSSAITTAKAYAQ
IASTNSANVLLLGESGTGKELFAQSIHNSSEFACGPFVAVNCGAIPKSLVESELFGYESG
AFTGAKREGSAGKFELANNGTIFLDEIGDMPYEVQVHLLRILQTREVTRVGGKKPIPLNI
RIIAGTNVDLQQAIEEKTFRSDLYYRLNVLSLQIPTLRERQEDIPILTDYFIRKYQPAGK
AQIRGVTDEVMRLFLEYPWPGNIRELENTVERACLLTTDVYIRPEHITASVLRYRAPAAP
APAVNEPARGTIHDAERELILKQLNESRGNVKNAAARLGISRRTLYRKMQKLEIDYQHLR
RRE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
ttgattgcagaagcgaaacgcgagcagatggaacgggccagatatcaattttttcacagc
ggggcggaagactacagcgtgtttcccaaagtggtttatgattcctggaagcgttcgctg
gcctatgggcttgatccggagaagcaatccgttaaaaggctcgcgccggaggagctggag
gcccgccgccggaaaaacgcggtgctgatggaggttgccacctcctttatggagttcctg
cataccctggtcaagggatcgggctttgtacttctcctgtcggacagcgacgggtatatc
ctgaagctgatcggggataaggacgcggtggctgacatccagtcaaaggaaaacccgctg
gtggaaggggcgtgccggcatgaatcggtgttcggcacgggcgggatcggcacgccgatg
gcgattcggaagcccgtccagcttgcctcctacgagatgttttatccgtccgagcatgag
tttactggaatcggcgcgccgctgatcgacgcggacggccggctgtggggcgcgatctgc
atgtcgggcgcctggaatcagacgcacccgcacacgctggggctggtggctgcggcaagc
tacgcgatcatgcggcagttttcgctgcaaaggctgtacaaccgccttgctgcggcggaa
aaccagcttcaaaccatcatttcgaccatcaaccagggcgtgttcctgctggacagcggc
tataccatcgtcaaaacaaacgacaccgcgctgcagatcctgggctataccaaggacgag
ctgctccggcagtccatcctggaaatcatgccctcgttcgacttcttcaagatgaagaaa
aacgtatatgaccgcgatttgacggtgcagggcaaatacggcacaatccgcgcgtttgtc
acgatacagatggtacagaacgccgcctcaagcgatggctcgggcctgttgatcaccttc
cggcagagtccggaggtgcgcaaatttgtcacaaaatatatcggcgcgaccgcctcgttc
aactttgacgacatcatcgggcagtcctccgccatcacaaccgccaaggcatacgcccag
atcgcaagcaccaactccgcgaacgtgctgctgctcggggagagcggtacgggaaaggaa
ctgttcgcgcagtcgatccacaacagtagcgaattcgcctgcgggccgtttgtggcggtg
aactgcggcgcgatacccaagagcctggtcgagagcgagctgttcggctacgagtcgggc
gcgttcaccggcgcgaagcgcgagggcagcgccggcaaattcgagctggccaacaacggc
acgatctttctggacgagatcggcgatatgccttacgaggtgcaggtccacctgctgcgc
atcctgcagacgcgcgaggtgacgcgcgtcggggggaagaagccgatcccgctcaatatc
cgcatcattgcgggtaccaatgtggacctgcagcaggcgattgaggaaaagaccttccgc
agcgacctgtattaccgtctgaacgtcctttccctccagataccgacgctgcgcgagcgg
caggaggatatcccgatacttacagattatttcatccgcaaataccagccggcgggcaag
gcgcagatacgcggcgttacagacgaggtgatgcggctcttcctggaatacccatggccg
ggtaatatccgcgagctggaaaatacggtcgagcgcgcctgcctgctgacgaccgatgtg
tatatccggccggagcatatcacggcgtcggtgctgcgttaccgcgcgccggccgcgcct
gcaccggcggtaaacgagccggcgcgcggcacgatccacgatgcggaacgggagctgatc
ctcaaacagctcaacgagtcgcgcggcaacgtcaaaaacgcggcggcgcgtctgggcatt
agccggaggacgctgtaccgcaaaatgcagaagctggagatcgattaccagcacctgcgc
cggcgggaatga
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