Intestinibacillus sp. NTUH-41-i26: RX717_02440
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Entry
RX717_02440 CDS
T09461
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RX717_02440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
int03019
]
RX717_02440
03016 Transfer RNA biogenesis [BR:
int03016
]
RX717_02440
Enzymes [BR:
int01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RX717_02440
Messenger RNA biogenesis [BR:
int03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RX717_02440
Transfer RNA biogenesis [BR:
int03016
]
Prokaryotic type
tRNA degradation factors
RX717_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
KH_2
SPATA25
PCB_OB
DUF5865
Motif
Other DBs
NCBI-ProteinID:
WOC75873
LinkDB
All DBs
Position
508545..510668
Genome browser
AA seq
707 aa
AA seq
DB search
MANINPFEFKNYRVFETEIAGRKLTVETGKMAQLANGSCLVRYGETAVLVTATASAKPRD
GIDFFPLSVDFEERLYAVGRIPGSFMRREGRPSEKAILASRQIDRPMRPLFPKDLRNDVS
IVCTVLENDYDNSPEVVALLGASIAVSISDIPFDYVVAGCQVGIVDGRTVINPTSEQRKV
SEMDVTLCATKDKIVMIEAGAKEVPEDDMFNALMEAHEELKKICAFIQGIKDEIGKPKFE
YEHHDIDHDLFDKLEAAVSDKFEVAMDTDDKTVRDAGVRAIVDEFEAGLSDEYKEEHGAN
LAECVDKLQKKIVRRWLANGKRVDGRGMEEVRPLAAEVHVLPRVHGSGMFTRGQTQVLTL
CTLGTLGDAQELDTIFEETEKRYIHHYNFPSFSVGETRPSRGPGRREIGHGALAERALLP
VIPPVSEFPYALRLVSEVISSNGSTSQGSVCGSTLALMDAGVPITAPVAGISCGLITDGG
QETTFTDIQGVEDFYGDMDFKVAGTKKGITAIQVDIKVDGLTPNIIKQAFEKCRVARYGI
LDEIMLKAIDKPRADVSDWAPKMTTMHIHPDKIREVIGKGGSVIQNIVAESGAKVDIEDD
GTVTIAAVKAADAEKARKMIEAIVKEPEPGEIYYGKVVRLMNFGAFVNLLPGKDGMVHIS
KMADHRIEKVEDAVKEGDMVWVKVMEIDDKGRVNLSMKDVKEEEKIK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatcaatccctttgagtttaagaattaccgcgttttcgaaaccgagatcgcc
ggccgcaagctgaccgtcgaaaccggtaagatggcgcagctcgccaacggctcttgcctg
gtgcgctacggcgaaaccgcggtgctcgtcaccgcgaccgcgtcggccaagccgcgcgac
ggcatcgacttcttcccgctttccgtggactttgaggagcgcctgtacgcagtcggccgc
atcccgggcagcttcatgcgccgcgagggccgtccgagcgaaaaggcgattctcgcctcc
cgccagatcgaccgcccgatgcgcccgctattccccaaggatctcagaaacgatgtgtcc
atcgtctgcaccgtgctggaaaacgactatgacaactcccccgaggtcgtcgccctgctg
ggcgcgtccatcgcggtgtccatttcggacatcccgttcgattatgttgtagcgggctgc
caggtcggcatcgtggacggccggacggtcatcaacccgaccagcgagcagcgcaaggtt
tccgagatggacgtgaccctgtgcgccaccaaggataagatcgttatgatcgaggcgggc
gcgaaggaagtacccgaggacgacatgttcaacgccctgatggaagcgcacgaggaactg
aaaaagatctgcgcattcatccaggggatcaaggacgaaatcggtaagcccaagttcgag
tacgagcatcacgatattgaccacgacctgtttgacaagctcgaggccgcggtaagcgac
aagttcgaggtcgcgatggacacggacgacaagaccgtccgcgacgcgggcgtacgcgcg
atcgtagacgagttcgaggccggcctttccgatgagtacaaggaggagcacggcgccaac
cttgcggagtgtgtggacaagctgcagaagaagatcgtgcgccgctggttggcgaacggc
aagcgcgtggatggccgaggtatggaggaagtccgtccgctggcggccgaggtacacgtt
ctgccgcgcgtacacggctcgggcatgttcacccgcggccagacccaggtgctgacgctt
tgcacgctgggtacgctgggcgacgcgcaggagctggacaccatctttgaagagactgaa
aagcgctatatccaccactacaatttcccgtccttctcggtcggcgaaacccgcccgtcc
cgcggcccgggccgccgcgagatcggccacggcgcgctcgcagagcgtgcgctgctgccg
gtcattccgcccgtgagcgagtttccgtacgcgctgcgcttggtatccgaggtcatttcg
tccaacggctcgacctcgcagggctcggtgtgcggctctaccctcgcgctgatggacgcg
ggcgtgccgatcaccgcgccggttgcaggtatttcctgcggcctcatcaccgacggcggc
caggagaccacttttaccgatattcagggcgtggaggacttctacggcgatatggacttt
aaggttgccggcaccaagaagggcatcaccgcgattcaggtagatatcaaggtggacggc
ctgactccgaacatcatcaagcaggcgttcgagaagtgccgcgttgcccgttacggcatt
ttggatgaaatcatgctcaaggcgatcgacaagccgcgcgcggacgtatccgactgggca
cccaagatgaccactatgcacatccatccggataagatccgagaggttatcggcaagggc
ggcagcgtgatccagaacatcgttgccgagtcgggagccaaggtcgatatcgaggacgac
ggcacggtcactatcgcggcggtcaaggcggctgacgcggaaaaggccagaaagatgatc
gaagccatcgtcaaggagccggagccgggcgaaatctactacggcaaggttgtgcgcctg
atgaacttcggcgcgttcgtcaatctgctgccaggcaaggacggtatggtgcatatctcc
aagatggccgaccaccgcattgaaaaggtggaggacgcggtcaaggaaggcgatatggtc
tgggtcaaggttatggagatcgacgacaagggccgtgtcaacctgtcgatgaaggatgtt
aaggaagaggaaaagattaagtaa
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