Intestinibacillus sp. NTUH-41-i26: RX717_06570
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Entry
RX717_06570 CDS
T09461
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03030
DNA replication
int03430
Mismatch repair
int03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RX717_06570
03430 Mismatch repair
RX717_06570
03440 Homologous recombination
RX717_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
int03032
]
RX717_06570
03400 DNA repair and recombination proteins [BR:
int03400
]
RX717_06570
Enzymes [BR:
int01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RX717_06570
DNA replication proteins [BR:
int03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RX717_06570
DNA repair and recombination proteins [BR:
int03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RX717_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
RNase_H_2
Rv2179c-like
HHH_3
YhfH
DUF2256
DUF655
Motif
Other DBs
NCBI-ProteinID:
WOC76630
UniProt:
A0AA97DVV6
LinkDB
All DBs
Position
1286465..1290244
Genome browser
AA seq
1259 aa
AA seq
DB search
MRATSARARKKVRDDDLIFGKLIQDPIVSVNEAIAAYDMVTIQGEVFFTDNKDIHSKKTG
KDYVKIAFDMTDRTNSVRVSKFLAADKAGDTASHIKNGLYCTVQGKMVYDSFAKEMVLEP
TGIVKAKKPVRQDKAEGMKRVELHLHTNMSAMDGMSSTAALLCRAAQWGHRAMAITDHGV
AQAFPEALHAQEGKQKDIIGDMKIIYGIEAYYVNDADSLSVVRGGSVEPLEGTFIVFDLE
TTGLNPASEEITEIAAVRVTDGAIHDAFQTYVNPHKPIPEEITKLTGISDETVADAPDLG
EAVPKFLAWAGEGRYPLVAHNAGFDMGFLRAACKRLSIEREFTAIDTLEMSRMMLPHLHK
FKLNILAKELQVGPFEHHRASEDAAVLGRIFVKLLARLREEMHARTVADINPVLAATTDR
KNKLKNLPRYHFIILVKNQAGLRNLYQLISKSFLEYYNKRPIMPRSELIRHREGLIFGSA
CEAGEVFRALTGNAEWDELKRLASFYDYLEIQPIGNNNFMIGKGMAKDEEQLRDWNRAIL
RLADELGKPCCATGDVHFLEPEDEAFRRILMAGQGFGDADNQAPLYFKSTDEMLKEFAYL
GADRAYEVVVRNTNRIADMCDVIRPVPRENYPPHIDGCEDDLRNMCYEKAKRIYGDPLPE
LVQARLDRELNSIIGNGYAVMYIIAQKLVTKSLADGYLVGSRGSVGSSLAAFMSDITEVN
SLAPHYLCPDDKYVEWHEEYSCGVDLPDKVCPTCGKPLTKQGFNIPFETFLGFEGDKVPD
IDLNFAGEYQSRIHHYTGEIFGHDHVFRAGTIGTVAEKTAYGYVKKYMDERGIECSRAEE
NRLAAGCTGVRRTSGQHPGGVVVVPKEIEIYDVCPVQHPADDPDSDIITTHFEYHSIDAN
LLKLDELGHDDPTMIKHLENLTGVNAQEIPLDDPDTMSLFHSCKALKYTGENPDTDPILG
DLGCLAVPEFGTKFVRGMVKETHPSTFAELVSISGLSHGTDVWLGNAAELVRRGIPLSGC
ICCRDDIMNYLILQGVKPKLAFKTMESVRKGKGLTEEMEAAMNEQNVPDWYIDSCKKIKY
MFPKAHAVAYVMMAFRIAWFKVHRPLAFYSAYFSVRAKGFDASCMIKGDKVCIDKIKELQ
MKDREKTISAAEKEMMTTLEVCHEFYRRGFVFEPMDIYTSAATDFIVTEKGLIPPFTSMP
GIGEQAAQNIVEERRNGRFLSAEEMAVRCPKASKAVVELLDQIGALGSMPKTTQISLFA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctaccagcgcccgcgcacggaaaaaggtgcgcgacgacgacctgatcttcggc
aagctgatacaggacccgatcgtgtcggtcaacgaggcgatcgcagcttacgatatggtc
accattcagggcgaggtgttcttcaccgacaacaaggacatccacagcaaaaagaccggc
aaggactatgtaaagattgcgttcgatatgaccgaccgcacgaactcggtgcgcgtgtcc
aaattcctggctgcggacaaggcgggcgacacggcctcccacatcaaaaacggcctgtac
tgcacggtgcagggcaagatggtgtatgactcgttcgccaaggagatggttttggagccg
accggtatcgtcaaggcgaaaaagcccgtacggcaggacaaggccgagggcatgaagcgc
gtcgaactgcatctgcacaccaatatgagcgcgatggatggtatgtcctccactgcggcg
ctgttgtgccgcgctgcgcagtggggacaccgcgccatggcgatcaccgaccacggtgta
gcgcaggcctttcccgaagccctgcatgcgcaggagggcaagcagaaggacattattggg
gatatgaagatcatttatggcattgaggcgtactatgtcaacgatgcggacagcctttcg
gtcgtgcggggcggctcggtcgaaccgctggagggaacgttcatcgtgtttgacctggaa
accaccggtctcaatcccgcgagcgaggagatcaccgagatcgcggccgtgcgcgtgacc
gacggggcgatccatgacgcgttccagacctatgtcaacccgcacaagcccattcccgag
gaaattaccaagctgaccggcatttcggatgagacggtcgcggacgcgcccgacctcggc
gaggcggtccccaaattcctcgcttgggcgggggaggggcggtatccccttgttgcgcac
aacgcgggctttgatatgggttttctgcgcgcggcctgcaagcggctttccatcgagcgg
gaattcaccgcgatcgacacgctggaaatgtcgcgcatgatgctgccgcacctgcataaa
ttcaagctgaacatcctggccaaggaactacaggtcggtccgttcgaacatcatcgcgcg
agcgaggacgcggccgtgctggggcgcatcttcgtcaagcttctggcgcgcctgcgggag
gaaatgcacgcgcggactgtggcggatatcaatccggtgctcgccgcgacgaccgaccgc
aagaacaagctgaaaaacctgccgcgctatcatttcatcatcctagtgaaaaaccaggcg
gggctgcgcaacctgtaccagctcatctccaagagttttctcgaatactacaataagcgg
ccgatcatgccgcgctcggagctgatccgccaccgcgaggggctgatctttggctcggca
tgcgaggcgggagaggtgttccgcgccttgacgggtaatgcggagtgggacgagctgaaa
cggctcgcgtccttttacgattatctggagatccagcccatcggcaacaacaactttatg
atcggcaagggcatggctaaggatgaggagcagctccgcgactggaaccgcgcgatcctg
cgccttgcggacgaactgggcaagccctgctgcgcgaccggcgacgtacactttcttgag
cctgaggacgaggcgttccgccgcatcctgatggcagggcagggcttcggcgacgcggat
aaccaggcaccgctgtacttcaagtccacggacgagatgctgaaggaattcgcctacttg
ggtgcggaccgcgcgtacgaggtcgtggtcaggaacacgaacaggatcgcggacatgtgc
gacgtgatccgtcccgtgccgcgcgaaaactacccaccgcacatcgacggctgcgaggac
gacctgcgcaatatgtgctatgaaaaggccaagcgcatctacggcgatccgctgcccgag
ttggtgcaggcgcggctcgaccgcgagctgaactccatcattggcaacggctacgcggtc
atgtacatcatcgcgcagaagcttgtgaccaagtcgctcgcggacggctatctggtcggc
tcgcgcgggtcggtcggctcgtcgctcgcagcatttatgtcggatatcaccgaggtaaac
tcgctcgcgccgcattacctgtgtccagacgacaaatacgtcgagtggcacgaggaatat
tcctgcggcgtggacctgccggacaaggtatgcccgacctgcggcaagccgctgaccaag
cagggctttaacatcccgttcgaaaccttcctcggcttcgagggcgataaggtgccggat
atcgacctgaattttgcgggcgagtaccagtcgcgcatccaccactacacaggcgagatt
ttcggacacgaccatgtgttccgcgcgggtacgatcggcacggtggcggaaaagaccgcc
tacggctatgtcaaaaaatacatggacgagcgcggcatcgagtgttcgcgcgcggaggag
aaccgcctcgccgcgggctgcacgggcgtacgccgcacctcaggccagcacccgggcggc
gtggtcgtggtacccaaggagatcgaaatttacgacgtgtgtccggtgcagcatccggcg
gatgatccggattcggacatcatcaccactcattttgaatatcactcgatcgacgccaac
ctgcttaagctcgacgagttgggacacgatgacccgaccatgattaagcacctggaaaac
ctgaccggcgttaacgcgcaggaaatcccgcttgacgatcccgacaccatgagcctgttc
cattcgtgcaaggcgctgaaatacacgggcgaaaatccggataccgaccccatcctgggc
gacctcggctgcctggccgtacccgagttcggcaccaagttcgtgcgcggcatggtcaag
gagacccacccttcgacgtttgccgaactggtctccatttccggcctgtcgcacggcacg
gacgtgtggctgggcaacgcggccgaactggtgcgccgcggtattccgctgtccggctgc
atctgctgccgcgacgatatcatgaactacctgatattgcagggcgtcaaacccaagctc
gcgttcaaaactatggaaagcgtgcgcaagggcaagggactgaccgaggaaatggaagcc
gcgatgaacgagcagaacgtgccggactggtacatcgattcgtgcaaaaagatcaagtac
atgttcccaaaagcgcacgcggtcgcttatgtgatgatggcgttccgtatcgcgtggttc
aaggtacaccggccgctggcgttctattccgcgtatttttccgtgcgcgccaaggggttt
gatgcgtcctgcatgatcaagggcgataaggtgtgcattgacaagatcaaggagttgcag
atgaaagaccgcgaaaagacgatctccgcggcggaaaaggaaatgatgaccacgctcgag
gtgtgccatgagttttaccggcgcggcttcgtattcgagccgatggacatttacacctcg
gccgcaactgatttcattgtgaccgaaaagggactgatcccgccgtttacctcgatgccc
ggcatcggcgagcaggcggcgcagaatatcgtggaggaacggcggaacggcaggttcctc
tccgccgaggagatggcggtgcgctgccccaaggcgtccaaggcggtggtcgagctgctc
gaccagatcggcgcgctcggctcgatgcccaagaccacgcagatcagcctgtttgcgtaa
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integrated database retrieval system
