Intestinibacillus sp. NTUH-41-i26: RX717_08660
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Entry
RX717_08660 CDS
T09461
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03420
Nucleotide excision repair
int03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RX717_08660
03430 Mismatch repair
RX717_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
int03400
]
RX717_08660
Enzymes [BR:
int01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RX717_08660
DNA repair and recombination proteins [BR:
int03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RX717_08660
MMR (mismatch excision repair)
Other MMR factors
RX717_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOC74099
UniProt:
A0AA97DS36
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All DBs
Position
1692652..1694805
Genome browser
AA seq
717 aa
AA seq
DB search
MQDVLKNLNAAQREAVTTTEGLIRVVAGAGSGKTRALAHRFAYLVNEAGILPGNILCVTF
TNKSAGEMRQRIRQLTGDSDAGYICTFHSFCVSVLQEDSHAVQYPKRFLVLDNSDIDTML
QTVYEERNLTLRHMTFSRARDMIEIRKLFQEPDYYQDMLAMPLEGLREKYLSAAAVEDII
FYGYLYQEKKCFGLDYNDLIKFTLYLFEQDAGIRLKWQRRLEYIMIDEFQDIDELQYKLM
CVLCGYHRNLFIVGDPDQTIYTWRGANVKYLLDFDKAFPNCKTIMMMQNYRSSPQILRAA
NSLISKNVHRIKKELLSTLPDSGPVFFHHAESAEQEAEWIAAKIAELEQQGVPYQDITIL
YRAHYVTRTLEEVFRRRKLPYVIYSGAQFFDRKEIKDALSYLRMTAYRDDLSFQRIVNTP
KRNLGEKRMRFLKLYAEQNGCSLYEALHRCLEDELFRNTKARPFIQLIEETAARYAGKPV
SEVLGMLLNRSGYEEMLRTEGNQDRLDNLAELKQSIYEYEAACGEECTLEDYLSHVALFS
NSDTSERRNAVKMMTVHTAKGLEFPYVFLCSLCEGVFPSVKTKTLPAMEEERRLAFVAMT
RAEGGLFLSDNAGRNIDGSSRIPSRFVFDIDRLLLQYTAELPESLVAEASDHIRFHQRQL
SALAAGPSFSAGQRISHPIFGDGAILAIDREASTYTVQFDDIPTPRSISFRVRITPL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgtcctgaaaaacttaaacgccgcgcagcgtgaggcggtcacaacgaccgag
ggcctgatccgcgtcgttgcgggcgccggctccggaaagacgcgcgcgctcgcgcaccgg
tttgcctatctggtaaacgaagctggcatcctgcccggcaatattctgtgcgttaccttt
acgaataaatcagcgggtgaaatgcgtcagcgaatccgccagcttaccggagatagcgac
gcaggctatatctgcacctttcacagcttttgcgtatccgttttgcaggaggacagccat
gccgtgcagtatcccaagcgcttcctcgtgctggataattcggatatcgacaccatgctg
caaaccgtttatgaggaacgaaacctcaccctgcgccatatgacgttcagcagggcgcgg
gatatgatcgaaatacgcaagctgtttcaggagccggactattaccaggatatgctggcc
atgccgctggaggggctgcgcgagaaatatctctctgccgccgctgtggaggatatcatt
ttttacggctatctgtatcaggaaaaaaagtgctttggcctagattataacgatctgatc
aaatttacgctgtatctttttgagcaggacgccggcatccgtctgaaatggcaaaggcgc
ttggaatatataatgatcgatgaattccaggatatcgacgagctgcagtataagctgatg
tgcgtactctgcggctatcacaggaacctgttcatcgtcggggaccccgatcagacgatc
tatacctggcgcggcgccaatgtaaaatacctgctggattttgacaaagcgtttccgaac
tgcaaaaccatcatgatgatgcagaactaccgttcctccccgcaaatcctgcgggcagcc
aattccctgatctccaaaaatgtccaccgcatcaaaaaggaactcctctcgactttgccg
gatagcggtccggtgttttttcaccatgcggaatccgcggagcaggaggcggaatggatc
gccgcaaaaatcgcggagctggagcagcagggcgtcccttatcaggatattacaatcctt
taccgtgcgcattatgtaacgcgaaccttggaagaagtctttcgcaggcgcaagcttccc
tatgttatatacagcggcgcgcagttttttgaccggaaagagatcaaggacgcactctct
tacctccgcatgacggcctatcgggacgacctttctttccagcgtattgtcaataccccc
aaacgaaacctcggtgaaaagcggatgcgcttcctgaagctctatgcggaacaaaacggc
tgctcgctgtacgaagcgctgcatcgttgtttggaagacgaactgttccgaaacacgaaa
gcgcgcccgttcatccagttgattgaggaaaccgcggccagatatgccggcaagcctgtc
tccgaggttctcggcatgctgctcaaccggagcggctatgaggaaatgctgcggacggag
ggcaatcaggaccggctggataatttggcggagctgaagcagtccatctatgaatatgaa
gccgcctgcggcgaagaatgtactttggaggattatctttcccatgtcgcgcttttttcc
aacagcgatacatcggagcggcgcaatgccgttaaaatgatgaccgtccatacggcaaag
gggctggaattcccgtatgttttcctctgttcgctttgcgagggcgtgttcccctctgtc
aaaacgaaaaccctgccggccatggaggaggagcggcggctcgcttttgtcgccatgacc
cgcgcggaaggcgggctgttcctatcggacaatgcaggccgcaacatagatggctcctcc
cgcatcccctcccgcttcgttttcgatatcgaccgcctgctgctacagtataccgccgag
cttccggaaagccttgtggccgaagcctcggaccatatccgctttcaccagcgtcagctc
agcgccttggcggccggcccttctttttcagcgggacagcggatctcgcatcctattttt
ggcgacggcgccatccttgccatcgatcgggaagcttccacctacaccgttcagttcgac
gatatcccaacgccgcgcagcatctccttccgcgtccggatcacaccgctttag
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