Intestinibacillus sp. NTUH-41-i26: RX717_09240
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Entry
RX717_09240 CDS
T09461
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RX717_09240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
int03400
]
RX717_09240
Enzymes [BR:
int01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RX717_09240
DNA repair and recombination proteins [BR:
int03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RX717_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
PIF1
AAA_16
HHH_2
UvrD_C
AAA_22
nSTAND3
AAA_28
AAA_12
T2SSE
AAA_33
TsaE
AAA
HerA_C
AAA_5
Mg_chelatase
UvrD-helicase
NTPase_1
CPT
NPHP3_N
KTI12
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
WOC74210
UniProt:
A0AA97H9B1
LinkDB
All DBs
Position
complement(1803263..1805512)
Genome browser
AA seq
749 aa
AA seq
DB search
MDEREYVLIRGTVEQIVFYNQENGYAVLRLASEEGAEVTATGTFPNIGPGEQVILTGYWV
THPSYGEQFATEAFERRLPSSVRGIAEYLGSGLIRGVGQRLAARIAERFGEDTFDVLTHA
PDRLTEIRGITEKKAREIGRQFIEQSEMRLLMDFLSEHNLPVSLTPLLYKRLHDSAIDAL
CENPYLLCDPYYDVEFRIADGLAMELGLSLLSDERADAGVLYTLTFNLDNGHTFIPMEKL
THTVCVLLSDEDVEFDEARALESILRLSERGKLVREQIAGRDAVYLRSIHDAEAYLAEML
GGMAERCFLYDFDVDELLGALMEGSEFPYSEKQKQAISVAARSGLVILTGGPGTGKTTTV
RGILQVFEALGLHTLLAAPTGRAAKRLSDLTGIEARTIHRLLEAGFAAGGRTAFARNLTN
PLECDAVILDEVSMVDITLMQALVEALPHGARLVLVGDADQLPPVGPGNFLRDMIGSHRV
PTIGLTEIFRQAQKSDIVMNAHAVNAGRMPVPSGADGDFFFLKRSEPSAVIETVAQLCAS
RLPKHYGFTPAQIQVLSPAKRQGSGTVALNRRLQEALNPPAESKLEKRFGDWIFREGDRV
MQVRNNYDIVWERREDEEQGTGIFNGDVGEILQIFPQQECMVIRFDDRIATYTYDMLGEL
ELAYAVTVHKSQGSEFDAVVLALSDGLPRRLLTRNILYTAITRARQLLVIVGSADTVAYM
VENNQKGRRYSALKARLRAEPTPNASVLG
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaaagagaatacgtattgatacgcggcacggtggaacagatcgttttctataat
caggaaaacggttacgccgtgctgcgccttgcgtccgaagagggggcggaggtaacggcg
accggcacgttccccaatatcggacccggggaacaggtaatcctgaccggttattgggtt
acacatccctcctatggagagcagttcgccacagaagcgtttgagcggcgtctgccatcg
tccgtgcgcggcatcgccgaatacttgggttccggactgattcgcggtgtggggcagcgc
ctggcggcgcggatcgcggagcgctttggggaagatacctttgacgttctgacacatgct
cccgaccgcctgactgagatcagggggattacggaaaagaaagcgcgggaaatcggcagg
cagtttatcgagcaaagcgaaatgcgcctgctgatggattttttgagcgagcataacctg
ccggtatcgctgacgccgctgctgtataagcggttgcatgacagtgcgatcgacgcgttg
tgtgagaacccatatctgctgtgcgatccgtattatgatgttgaattccgtatcgcagac
gggctggcaatggagctggggctgtcgttgctgtcggacgaacgggcagacgcgggcgtg
ctgtataccctgacgtttaacctggataacgggcatacgttcataccgatggaaaagctg
acccatacggtctgcgtgctgctgtcggatgaggatgtggagtttgatgaggcgcgggcg
ctggagagcatcctgcggctgagcgagcgcgggaaactggtgcgggaacagattgcgggc
agggacgcggtctatctgcgcagcatccatgacgctgaagcctatctcgcagagatgctg
ggcggtatggcggagcgctgctttttgtatgactttgacgtggacgagctgctcggcgcg
ctgatggagggcagtgaatttccctattcggaaaagcagaagcaggccatttccgtggcg
gcgcgcagcgggcttgtgatcctgaccggcgggccgggtacgggcaaaacgaccaccgtg
cgcggcatcctgcaggtttttgaggcattgggactgcacacgctgctcgcggccccaacc
ggacgggcggccaaacgcttatccgatctgaccggtatagaggccagaaccatccaccgg
ctgctggaagccggctttgccgccggagggcgcaccgcctttgcgcgtaacctgacgaat
ccgttggaatgcgacgcggtgattctggacgaggtatccatggtggatatcacgctgatg
caggcgttggtcgaggcgctgccgcatggggcgcggctggtgctggtgggtgacgcggac
cagctcccgccggtgggaccggggaatttcctgcgggatatgatcggctcacaccgtgtt
ccgacaattgggctgaccgagattttccggcaggcgcagaaatccgatatcgtgatgaat
gcgcatgcggtcaatgcgggccgaatgccggtcccatccggcgcggacggagacttcttc
ttcctcaagcgctccgagccgtccgcggtgatcgaaacggtcgcgcagctttgcgcgtcg
cgcttgccgaagcattacggctttacccctgcgcagattcaggtgttgtcgcccgccaag
cggcaggggagcggcacggtggcgctcaaccggcgcttacaggaagctctcaatccacct
gcggaaagcaagttggaaaagcgcttcggggactggatattccgcgagggggatcgggtg
atgcaggtgcgcaacaattacgacatcgtatgggagcgtcgggaggacgaggagcagggg
accggcatattcaacggcgatgttggggaaatactacagatattcccgcagcaggaatgc
atggtcatccggtttgacgaccgcatcgcaacctacacctatgatatgctgggcgagctg
gaactggcgtatgcggtcacggtacacaagtcgcagggcagcgagtttgacgcggtcgta
ctggcgctgtccgacgggttgccgcgccgcctgctgacgcgcaacatcctttataccgcg
atcacgcgcgccaggcagcttctggtgatcgtcggcagcgcggatacagtcgcttatatg
gtggaaaacaaccagaaaggcaggaggtacagcgcgctcaaggcgcgtctgcgcgcggaa
ccgacgccgaatgcatcggttctcggataa
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