Intestinibacillus sp. NTUH-41-i26: RX717_09695
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Entry
RX717_09695 CDS
T09461
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RX717_09695 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
int03400
]
RX717_09695 (uvrA)
DNA repair and recombination proteins [BR:
int03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RX717_09695 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RX717_09695 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_21
AAA_25
ATPase
nSTAND3
YhfH
DnaJ_CXXCXGXG
DUF4350
HlyD_D4
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
WOC74292
UniProt:
A0AA97DRP9
LinkDB
All DBs
Position
complement(1883579..1886425)
Genome browser
AA seq
948 aa
AA seq
DB search
MQEFIHVKGAREHNLKNIDIKIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLGQMDKPDVDYIDGLSPAISIDQKTTSQNPRSTVGTVTEIYDYLRLLWANIGTPH
CPKCGKEIHQQTIDQIIDRLMALEEKTRVQILAPVIRGKKGEHVKVLEDARKAGYVRVRV
DGEVRDLSDDIKLAKTHKHNIEIVVDRVVIRPDARGRITDSVETASALSGGLVIADVVGG
EPIAFSQNYACDDCGISIEELTPRMFSFNNPYGACPVCTGLGMQMRVDPDRIIPNKKLSI
KQGAIRASGWGSAEPGTIAGMYFTALGKKHGFTLDTPIEDFSDKALHELLYGTGDEPLEL
SVSRVSGGVMRQPFEGIVVNLERRYKETSSDYSRAEIEECMSEIPCPACHGRRLRPEVLA
VTIGGLNIAEFSEKSVVKAMEFLQTLQLTEMQHKIGDRVIKEIKDRLGFLQSVGLEYLTL
SRASGTLSGGESQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDKLLATLKRLRDLGNT
LIVVEHDEDTMFAADHIVDIGPGAGRNGGAVVFEGTVDELLQSEQSITGQYLSGRKCIPV
PAVRRKGNGKKLTVKGCAVNNLKHTDFTIPLGTLTCVTGVSGSGKSSFVNEILYKKLAAE
LNGAKTRAGAHDKFVGLSYLDKVIDIDQSPIGRTPRSNPATYTGVFNDIRDLFAKTADAK
ARGYGPSRFSFNVKGGRCEACAGDGLLKIEMHFLPDVYVPCDVCKGKRYNKETLEVRYKG
KNIYEVLDMTVDEACEFFANVPKIARRLGTMREVGLGYVKLGQSSTTLSGGEAQRAKLAT
ELSKRSTGKTIYILDEPTTGLHVADVHRLVDVLQKLVDAGNTVVVIEHNLDVIKTADYIL
DLGPEGGDGGGRLVAAGTPEEVAACEGSYTGQYLKPVLERGRQREEKR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatttatccacgtaaagggtgcgcgcgagcacaacctgaaaaatatcgatatc
aagatcccgcgcgacaagctggtcgtgctgaccggactgtccggctcgggcaagtcgtcg
ctggcgtttgacacgatttatgccgagggacagcgacgctatgtcgagtcgctgtccagc
tacgcgcggcagtttttggggcagatggacaagccggacgtggactacatcgacggcctt
tcgcccgcgatttcgattgaccagaagaccacctcgcagaatccgcgctcgacggtcggc
acggtcaccgaaatctacgactacctgcgccttttgtgggcgaacatcggcacgccgcac
tgccccaagtgcggcaaggaaatccaccagcagaccatcgaccagatcatcgaccggctg
atggcgctggaggaaaaaacgcgcgtccagatcctcgcgccggttatccgcggcaaaaag
ggcgagcacgtcaaggtactcgaggacgcgcgcaaggcgggctacgtccgtgtgcgcgtg
gacggcgaggtgcgcgacctgtccgatgatatcaagctggccaagacccacaagcacaac
atcgagattgtggtcgaccgcgtggtcatccggccggacgcgcgcggccgcatcacggac
tcggtcgagactgcgtccgcgctctcgggggggctggtcatcgcggacgtagtcggcggc
gagccgatcgcgttctcgcagaactatgcgtgcgacgactgcggcatctcgattgaggag
ctgacaccgcgtatgttctcgttcaacaacccgtacggcgcgtgtccggtgtgtaccggc
ctcggcatgcagatgcgtgtcgatccggaccgcatcatccccaacaaaaagctgtccatc
aaacagggcgcgatccgcgcgtccggctggggcagcgccgagccggggacgatcgcgggc
atgtacttcaccgcgctcggcaaaaagcacggcttcacgctggacaccccgatcgaggac
ttttcggacaaggcgctgcacgagctgctgtacggcactggagacgagccgctcgagctg
tcggtcagccgcgtgtcgggcggcgtgatgcgccagccgttcgagggcatcgtcgtgaac
ctcgagcgccgctataaggaaacgtccagcgactattcgcgcgccgagatcgaggagtgc
atgagcgagatcccctgccccgcgtgccacggccgccgcctgcggcccgaggtgctcgcg
gtcacgattggcgggctgaacatcgccgaattttcggaaaagtcggtcgtcaaagcgatg
gagtttttacagaccctgcagctgaccgagatgcagcacaagattggcgaccgcgttatc
aaggagatcaaggaccggctgggcttcctgcagtcggtcggcctggaatacctgaccttg
tcgcgcgcctccggcacgctgtccggcggcgagagccagcgcatccggctggcgacgcag
atcggctcgtcgctcatgggggtgctgtatatcctggatgagccgtccatcggcctgcat
caacgcgacaacgacaagctgctggcgacccttaaacgcctgcgcgacttgggcaataca
ctgatcgtggtcgagcacgatgaggataccatgttcgccgccgatcatatcgtggatatc
ggcccgggcgcgggccggaacggcggcgcggtcgtgtttgaaggcacggtggacgagctg
ctgcaaagtgagcagtccatcaccggacagtacctgtccggccgcaagtgcatccccgtg
cctgcggtgcgccgcaagggcaacggcaaaaagctgaccgtcaagggctgcgcggtgaac
aacctcaagcacacggatttcaccattccgctgggtacgctcacctgcgtgaccggtgtg
tccggctcgggcaagtcctcgttcgtcaacgagatcctgtacaaaaagctcgccgccgag
ctgaacggcgccaagacgcgcgcgggcgcgcacgataagttcgtcggcctgtcctatctg
gacaaggtgatcgatatcgaccagtcgcccatcgggcgcacgccgcgctccaaccccgcg
acctataccggcgtgttcaacgatatccgcgacctgttcgccaagaccgcggacgcaaag
gcgcgcggctacgggccgagcaggttctctttcaacgtcaagggcggccgttgcgaggcc
tgcgcgggcgacggccttttgaaaatcgagatgcacttcctgccggacgtatatgtgccc
tgcgacgtgtgcaagggcaagcgctacaacaaggaaacgctcgaggtgcgctacaaaggc
aaaaatatctacgaggtgctcgacatgactgtggacgaggcgtgcgagttcttcgccaac
gtgcctaagatcgcccggcggctgggaaccatgcgcgaggtcgggctggggtacgtcaag
ctcgggcagtcgtccaccacgctgtccggcggcgaggcgcagcgcgccaagctcgccacc
gagctgtccaagcgctcgaccggcaagaccatctatatcctggacgagccaaccaccggc
ctgcacgtcgcagacgtacaccgcctggtggacgtgctgcagaaactggtggacgcgggc
aacaccgtggtcgtcatcgagcacaacctggacgtgattaagaccgcggactatatcctc
gacctcggtcccgagggcggggacggcggcggccgcttggtggccgcgggcacgccggag
gaggtcgccgcgtgcgaaggctcctataccggtcaatatctgaagccggtgcttgaacgc
ggcagacagcgcgaggagaagcggtaa
DBGET
integrated database retrieval system
