Intestinibacillus sp. NTUH-41-i26: RX717_09995
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Entry
RX717_09995 CDS
T09461
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03030
DNA replication
int03430
Mismatch repair
int03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RX717_09995
03430 Mismatch repair
RX717_09995
03440 Homologous recombination
RX717_09995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
int03032
]
RX717_09995
03400 DNA repair and recombination proteins [BR:
int03400
]
RX717_09995
Enzymes [BR:
int01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RX717_09995
DNA replication proteins [BR:
int03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RX717_09995
DNA repair and recombination proteins [BR:
int03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RX717_09995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WOC74350
UniProt:
A0AA97DS06
LinkDB
All DBs
Position
complement(1942356..1945871)
Genome browser
AA seq
1171 aa
AA seq
DB search
MVPFAHLHVHSEYSLLDGACRIEGLVERVAELGQTSCALTDHGVMYGVIDFYRACKAKGI
HPVIGCEVYLAPHSRFERSYVNGEWHSHLILLCENMTGYRNLIHMVSLGFSEGFYMKPRI
DMDLLRQHSEGLICLSACLAGVIPRALAEGDMDGAYELCEQFLDIFDRDHFYLEVQDHGI
EVQKKVNEGLYQLAKELDIGLVATNDAHYLTKQDAKIQDVLMSIQMGKTVDDPTRMKFET
QEFYIKDADEMAALFPEHPEALANTVRIAERCQVEFEFGKYHLPEFDVPKGYGALQYLQK
LCDEGFAKRYPDDDGTVRARLQYEIDMIAQMGFVDYFLIVSDFIGYAKSNGIPVGPGRGS
AAGSIVSYCLGITDLDPIHYSLYFERFLNPERVSMPDIDVDFCYVRRPEVIEYVTEKYGK
DRVAQIVTFGTMAARGAIRDVGRALSIPYNEVDAVAKQVPNELHITINKALAVNPELKKM
YDEKPQVRELIDTARALEGMPRHASTHAAGVVITKDPVDTYVPLARNDEQMVTQFTMTTL
EELGLLKMDFLGLRNLTVIADAEKMIRRHVPDFNIETVDMNDKATYEMLGRGSTMGVFQL
ESAGITNVVTGLRPASIEDITAVVALYRPGPMQSIPRYIECRHHPEKVTYKHPLLEPILK
VTYGCMIYQEQVMQVFQSLAGYSLGKADMVRRAMSKKKMKELEKERVNFIHGNETLGIDG
AVKRGVPEHIAAGLFDEIMDFANYAFNKAHAVCYAVVSFRTAYLKCHYPREYMAALLTSV
LDWSDKISEYIQAAREMGIRVLPPDVNESFDGFSVSGRDIRFGLAAVKGVGRSFMKQLVE
ERETGGLFSSFQDFCERMYDRELNRRALESLIKAGSFDSMGYRRSQLLQIVGAVVDAIAQ
SRKKNIEGQMDLFGMGNDEVQDTQIALPDIPEAGKRELLAMEKETTGLYLSGHPMDEYRE
LAKKADAASIRKIIDDLSGESTQPAYKDGMTVRLACVITSVRLKSTKNGSMMAYVTVEDE
SASIELIVFPRSLQQCGAYLTEDSAVLLTGKIDAREDEAPKVLLNEAQPLTESAVNSMLA
QQNPQRSVYTDQQAARLAPQKLFLRIDSMGSDEWPQIKAILLAQPGDTPVYLYPTDTRKK
TLAKREYWCQPDVPLLEKLRFLLGEEDVIMQ
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgtttgcgcacctgcatgtgcatagtgaatacagcctgctggacggcgcgtgc
cggatcgaggggctggtggagagagtggccgagttggggcagacctcatgcgcgctgacc
gatcacggcgtgatgtatggcgtgattgatttttaccgcgcctgtaaggccaagggcatc
catccggtgattggctgcgaggtatatctggcgccgcattcgcgttttgagcgcagctat
gtgaatggtgaatggcacagccatctgattttgctgtgcgagaatatgaccggctaccgc
aacctcatccatatggtgtcgctcggcttttccgagggcttttatatgaagccgcgcatc
gatatggacctgctccggcagcacagcgagggcctgatctgcctgtccgcgtgcttggcg
ggcgtgatcccgcgcgcgctggccgagggcgatatggacggcgcctatgagctgtgcgaa
cagtttttggatatttttgaccgcgaccatttctatctcgaggtgcaggaccatggcatc
gaggtgcagaaaaaggtaaacgaggggctgtatcagctcgcaaaagagctggatattggt
ttggtcgccacgaacgacgcgcactatctgaccaaacaggacgcaaaaatacaggacgtg
ctcatgtccatccagatgggcaagacggtggacgaccccacccgcatgaagtttgagacg
caggagttttatatcaaggacgcggacgagatggccgcactgttcccagagcatccggaa
gcgcttgcgaacaccgtcaggatcgcggagcgctgccaggtcgagtttgagtttggcaag
taccatctgccggaattcgatgtgccgaaggggtatggcgccctgcagtacctgcagaag
ctgtgcgacgagggctttgctaaacgctatccggatgacgacggcacggtgcgcgcccgc
ctgcagtatgagatcgatatgatcgcgcagatgggctttgtggattatttcctgatcgtt
tccgacttcatcggctatgccaagagcaacggtatccccgtcgggccggggcgaggctcg
gcggcgggctcgatcgtttcctactgcctgggcatcaccgacctggaccctatccactat
tctctgtattttgaacgcttcctcaatccggagcgcgtttccatgccggatatagacgtg
gatttttgttatgtgcgtcggccggaggtgattgagtacgtcaccgaaaagtacggcaag
gaccgcgtagcgcaaatcgtcacgttcggcaccatggctgcgcgcggcgcgatccgcgat
gtgggacgcgcgctgtcaatcccgtataacgaggtggacgcggttgccaagcaggtgcca
aacgagctgcacatcacgatcaacaaggcgctggcggttaatccagagctgaaaaagatg
tatgacgaaaagccgcaggtacgcgagctgatcgataccgcccgcgcgctcgagggaatg
ccgcggcacgcttcgacccacgcggcgggcgtggtcattaccaaggatccggtggatacc
tatgtgccgcttgcgcgcaacgatgagcagatggtcacccagttcaccatgaccacgctc
gaggaactggggctgctcaaaatggacttcctcggcctgcgtaacctgacggtgatcgcg
gacgcagaaaagatgatccgccgccatgtgccggattttaacatcgaaaccgtggatatg
aacgacaaggccacttatgagatgctcggccgcggctcaacgatgggagtgttccagctg
gaaagcgcgggtatcaccaacgtcgtcaccggcctgcgccccgcgtccatcgaggatatc
accgcggttgtggcgctgtaccggccggggccgatgcagtccatcccgcgctatatcgaa
tgccgccaccatccggaaaaggtgacctataagcacccgctgctcgaaccgatcctgaaa
gtcacctatggctgcatgatctatcaggagcaggtcatgcaggtgtttcagagcctggcg
ggttactcgctcggcaaggcggacatggtgcgccgcgcgatgagcaaaaagaagatgaag
gagcttgagaaagagcgcgtcaatttcatccacggcaatgagacgcttggcatcgacggc
gcggtcaaacgcggcgtgccggagcacattgcggcaggcctgttcgacgagatcatggac
tttgccaactatgcgttcaacaaggcccatgcggtgtgctatgcggttgtttccttccgc
acggcctatctcaagtgccattatccgcgcgaatatatggcagcgctgctcacctccgtg
ctggactggtcggacaagatttccgagtatatccaggccgcgcgtgaaatggggattcgg
gtgttgccgccggatgtgaacgagtcgttcgatgggttttcggtttccggacgggacatc
cgcttcggccttgctgcggtcaagggcgtcggccggtcgttcatgaagcagcttgtggag
gagcgcgagacaggagggctgttttcgtcgttccaggatttttgcgagcgcatgtacgat
cgggaactgaaccggcgtgcactcgaaagcctgatcaaagccggctcattcgattccatg
ggataccggcggagccagctgctgcagattgtgggcgcggtggtggatgcgatcgcgcag
agccgcaagaaaaacattgaggggcaaatggacctgttcggcatgggaaatgacgaggtg
caggatacgcagatcgccctgcccgatatccccgaggcgggcaagcgagagcttctggca
atggagaaagaaacgaccggcctgtacctgtccggtcatccgatggacgagtatcgggag
ctggcgaaaaaagcagacgcggcctccatccggaagatcatcgacgatctttcgggggaa
agcacccagcccgcctataaggatggaatgactgtgcggctggcgtgcgttatcacctct
gtgcggctcaaatccaccaaaaacggctcgatgatggcatatgtgacggtggaggatgag
tccgcgtcgattgagctgatcgtgttcccgcgctcgctgcagcagtgcggcgcctatttg
accgaggacagcgcggtactgcttaccggtaagatcgacgcgcgcgaggatgaagcgccc
aaggtgctgctgaacgaagcgcagccgctgaccgaaagcgcagtgaacagcatgctcgca
cagcagaacccgcagcggtcggtatataccgaccagcaggcggcgcggcttgcgccgcag
aagctgttcctgcgcattgacagcatgggcagcgacgaatggccgcagatcaaggccata
ctactggcgcagccaggcgatacgccggtttatctctatcccacggacactaggaaaaaa
acgctggccaagcgggaatactggtgccagccggatgtgccgcttttggaaaaattacgc
ttcctcttgggcgaggaagatgttataatgcagtag
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