Intestinibacillus sp. NTUH-41-i26: RX717_10985
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Entry
RX717_10985 CDS
T09461
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int02020
Two-component system
int02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
int00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RX717_10985
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RX717_10985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
int03021
]
RX717_10985
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
int02035
]
RX717_10985
Transcription machinery [BR:
int03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RX717_10985
Bacterial motility proteins [BR:
int02035
]
Flagellar system
Flagellar assembly proteins
Stator
RX717_10985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
HTH_37
HTH_3
baeRF_family11
PCI
GerE
Phage_terminase
HTH_12
Motif
Other DBs
NCBI-ProteinID:
WOC74519
LinkDB
All DBs
Position
complement(2144341..2145123)
Genome browser
AA seq
260 aa
AA seq
DB search
MEEQKQWAELSNEALLEEYKQSGDKELKKVLVMRYACLVKNVALKLRGVYASFAQVDDII
NEGIILLMNALDKFDLSQNVKFETFICKRLRGMIIDVARKQDWIPRSVRRHMREIDEANG
QLYTRLGRAPTDQEVAGHLGISVERYQAELAKTALCNVLSLDMMLDENDSDTLVKKLPQS
DADAQPEERYQKKEMQKVLRDSIAGLRENEQVVLSLYYQKMLQMKEIAKVLGVSEPRVSQ
IHSNAIRKLRAAMTAYIYDT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaacagaagcagtgggcagagctgtcgaacgaggcgctgctcgaagagtataag
cagtccggtgataaggaactgaaaaaggttctggtgatgcggtatgcctgtcttgtaaaa
aatgtggcactaaagctgcgtggggtttatgccagcttcgcacaggtcgatgatattatt
aacgaggggatcatccttttaatgaatgctctggataaatttgatctgagccaaaatgta
aagtttgaaacctttatatgcaaacgcctgcgcggcatgattattgatgttgcgcggaag
caggactggatcccccggtccgtgcgccgacatatgcgggagatcgatgaggccaatggg
caactatatactcgactgggcagggcgccaacagatcaggaggtggcagggcatcttggt
atcagcgtggagcgctaccaagcagagcttgccaagactgctttgtgcaatgtgctttcc
ctggacatgatgctggatgaaaacgattccgacacattggtgaaaaagctgccgcagagt
gacgcggacgcccagccggaggagcgttatcagaagaaggagatgcagaaagttttgcgt
gacagtattgcagggctgcgggaaaatgagcaggttgttctgtcactgtattatcagaag
atgttgcagatgaaagagatagcaaaggtgcttggcgtaagcgagccacgtgtttctcag
atccattccaatgcgatccggaagctccgagccgcaatgacagcctatatatatgataca
taa
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