Intestinibacillus sp. NTUH-41-i26: RX717_12380
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Entry
RX717_12380 CDS
T09461
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03420
Nucleotide excision repair
int03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RX717_12380
03430 Mismatch repair
RX717_12380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
int03400
]
RX717_12380
Enzymes [BR:
int01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RX717_12380
DNA repair and recombination proteins [BR:
int03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RX717_12380
MMR (mismatch excision repair)
Other MMR factors
RX717_12380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WOC74772
LinkDB
All DBs
Position
2419718..2422138
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AA seq
806 aa
AA seq
DB search
MEPTKFDLKYASIRRAIIERRFSSLNEKQREAVFATEGPLLILAGAGSGKTTVLINRIIN
ILRFGEGLDSSYAPAGATEEDLLFLTEYLTAPQPENREHAERLCAMHPAKPWEVIAITFT
NKAARELRERLQAALGDEESASAVWAYTFHTACLRILRRHVDLLGFETAFTIYDEDDKKR
VVTNVMKSLNLDTKTFDPRTVMSMISRAKDKLMTPRQFRADGAGDYFREKVAEVYQLYEK
EMKKACALDFDDIIMKTVLLLQSNPDVLEYYQRKFRYVLVDEYQDTNYAQYVLTSLLAGY
YENICVVGDDDQSIYKFRGATITNILEFEKQFKDAKTIRLEQNYRSTGNILNAANEVIRN
NVGRKGKELWTDHGDGAKIHLHRSDSQEGEAAYIADTIREGVEQGLRWGDFAVLYRNNVL
SDNIAAAFIRAGIPYRVYKGRDFFSRAEVRDMFAYLWVLENPADELRLRRIINVPARKIG
DKSVETAAQLAVGNGVTLYETVCHASDYPALSRGAAAMEKFGEMMENLRKQKEFLSLSEL
YDGLLDQTGYLAALEARGGAEEQSRIEHIEELKSYIVSYENDHDDASLAGFLEEMALYTD
ADQSGEEEDAVLMMTMHSAKGLEFPVVFLAGMEDGLFPGFRAMERDEDMEEERRLCYVAV
TRAKEQLYLTCAERRMLYGRTQYAHPSRFIDEMPRELLDSNIVERRMFQQVTQPDPGLSR
AQVARARYVSPAAAAPSFAAPAAQPAGSPLPDFSAGCRVRHKAFGDGMVVSVKPMGGDAL
LEIAFDQKGTKRLMAKSAAQFMEKLI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgaccaaattcgacctgaagtacgcgtccatacggcgcgccattatagagcgg
cgcttttcttccctgaacgaaaagcagcgcgaggcggtatttgccaccgaggggccgctg
cttatccttgcgggcgcgggtagcggcaaaaccaccgtgctcatcaaccgcatcatcaat
atcctgcgctttggcgaggggctggacagctcctatgcgcctgcaggcgccaccgaggag
gacctgctgttcctcaccgaatacctgaccgcccctcagccggaaaatcgggaacacgcg
gagcggctgtgcgccatgcatccggcaaagccgtgggaggtcatcgcgatcacgttcacc
aacaaggccgcgcgcgagctgcgcgagcgcctgcaggccgcgctgggagatgaagaatcc
gcctccgccgtctgggcctatacgttccataccgcctgcctgcgcatcctgcggcgccat
gtcgacctgctcggctttgagaccgctttcaccatctatgacgaggacgataaaaagcgc
gtcgtcacgaacgtgatgaaatcgctcaacctggataccaaaacgttcgacccgcgcacc
gtcatgagtatgatcagccgcgccaaggacaagctgatgacccctaggcagttccgcgcg
gacggggcgggcgactacttccgcgaaaaggtcgcggaggtgtaccagctttacgaaaaa
gaaatgaaaaaggcctgtgcgcttgatttcgacgacattatcatgaaaaccgtcctcctg
ctgcagagcaatccggatgtgctggaatactaccagcgcaaatttcgctatgtgctggtg
gacgagtatcaggacaccaactacgcccagtatgtgctgaccagcctgctggcgggctat
tacgagaacatctgcgttgtcggggacgacgaccaatccatttacaaattccggggagcc
accattaccaatattctcgaatttgaaaagcagttcaaggacgcgaaaaccatccgtctg
gaacagaactaccgttcgaccggcaatatcctgaacgccgccaacgaggtcatccgcaac
aatgtcggccgcaagggcaaggagctgtggaccgaccacggcgacggcgccaagatccac
ctgcaccgctcggacagccaggagggcgaggccgcctacatcgcggataccatccgcgag
ggagtggagcagggacttcgctggggtgatttcgcggtgctttaccgcaacaacgtcctg
tcggacaatatcgcggccgcgttcatccgcgcgggcatcccctaccgtgtgtacaaggga
cgcgacttcttctcgcgcgccgaggtgcgcgatatgttcgcttacctgtgggtgctggaa
aatccagcggacgagctgcgcctgcgccgcatcatcaatgtacccgcgcgcaagatcggc
gacaaatcggttgaaacggcggcacagctcgctgtgggaaacggcgtgacgctgtacgaa
acggtgtgccacgcgtcggactatcccgccctgtcccgcggcgcggcggcgatggaaaaa
ttcggcgaaatgatggaaaacctgcggaagcagaaggagttcctctccctttccgagctg
tacgacgggctgctcgaccagaccggctatctcgccgcgttggaagccaggggcggcgcg
gaggagcagagccgtatcgagcatatcgaagagcttaaatcctacatcgtcagctatgaa
aacgaccatgacgacgcttctcttgcgggcttccttgaggaaatggcgctgtacacagac
gccgaccagtccggcgaggaggaggacgcggtcctgatgatgaccatgcactcggccaag
gggctggaatttccggtcgtattcctcgcgggcatggaggacggcctgtttcccggcttc
cgcgcgatggagcgcgacgaggatatggaggaggagcgccgcctgtgctacgttgcggtg
acgcgcgccaaggagcagttgtacctgacttgtgccgaacggcgcatgctgtacggccgc
actcaatacgcgcatccctcccgctttatcgacgagatgccgcgcgagctgctcgacagc
aacattgtggagcgccgcatgttccagcaggtcacccagcccgaccccgggctgtcccgc
gcgcaggtcgcgcgggcgcgttatgtttcccctgccgcggccgccccctcctttgccgct
cccgcggcacagccggccggttcccccctgcccgatttctccgccggctgccgcgtacgc
cacaaggcattcggcgatgggatggtcgtttcggtcaagcccatgggcggcgacgcgctg
ctcgaaatcgccttcgaccagaaaggcaccaagcggttaatggcaaaatcggccgcgcaa
tttatggaaaaactgatataa
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integrated database retrieval system
