Intestinibacillus sp. NTUH-41-i26: RX717_13405
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Entry
RX717_13405 CDS
T09461
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RX717_13405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
int03021
]
RX717_13405
03400 DNA repair and recombination proteins [BR:
int03400
]
RX717_13405
Enzymes [BR:
int01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RX717_13405
Transcription machinery [BR:
int03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RX717_13405
DNA repair and recombination proteins [BR:
int03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RX717_13405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WOC74964
UniProt:
A0AA97DR50
LinkDB
All DBs
Position
complement(2599324..2600271)
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AA seq
315 aa
AA seq
DB search
MIEIEKPRIDCEQLAEDGSYGKFVVEPLERGYGTTLGNSLRRILLSSLPGTAASSIKIAG
VQHEFSTIPGVKEDVTEIVLNIKGIIAKLHCDGPKTVYIEAAGEGEVKAGDIHADGEVEI
LNPDLHIATLMSDARLSMEITLTSGRGYVPAEKNKQHQTSIGVIPVDSIYTPVYKVNYTV
ENTRVRDLTDYDKLTLEIWTDGTITARDAVSLGAKVLRDHLDLFVDLSDEIGSKSTVVEK
AEAQHDKVLEMTIEELDFSVRSFNCLKRAGINTVEDLINTSEEDMMKVRNLGRKSLEEVI
GKLEAMGLSLAKSDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatcgaaaagccgcgtattgactgtgaacagctcgctgaagacggctcttac
ggcaaattcgtcgtggaaccgctggagcgcggatatggcaccacgctgggcaactccctg
cgccgcattctgctttcgtcgctgccgggtacggccgcgtcgagcatcaagatcgccggc
gtgcagcatgagttctccaccatcccgggcgttaaggaagacgtgaccgagatcgtactg
aacatcaagggcatcatcgccaagctgcactgcgacggccccaagacggtctacatcgag
gccgccggcgagggcgaggtaaaggctggcgacatccacgctgacggcgaggtcgagatc
ctcaatcccgacctgcacatcgctaccctgatgagcgatgcgcgcctgtccatggagatc
acgctgacttcgggccgcggctacgttccggccgagaagaataagcagcaccagacctcc
atcggcgtcattccggtggattcgatctacacaccagtttacaaggtcaactatacggtg
gagaacacccgtgtgcgcgacctgaccgactatgataagcttacgctcgagatctggacc
gacggcaccatcaccgcgcgcgacgcggtttcgcttggcgcaaaggtgctgcgagaccat
ctcgacctgttcgtcgacctgtccgacgagatcggctccaaatccacggttgttgaaaag
gccgaagcgcagcacgataaggtgcttgagatgaccattgaggagcttgacttctcggtg
cgctcgttcaactgcctcaagcgcgcgggtatcaacacagtggaggatctgatcaacacc
tcggaagaggacatgatgaaggtccgcaacctgggccgcaaatcgctggaagaggtcatc
ggcaagctggaggccatgggcctgtcgcttgccaagtccgacgaataa
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