Intestinibacillus sp. NTUH-41-i26: RX717_15205
Help
Entry
RX717_15205 CDS
T09461
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
int
Intestinibacillus sp. NTUH-41-i26
Pathway
int03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
int00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RX717_15205 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
int03019
]
RX717_15205 (rny)
Messenger RNA biogenesis [BR:
int03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RX717_15205 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
UPF0154
Motif
Other DBs
NCBI-ProteinID:
WOC75306
UniProt:
A0AA97HBG2
LinkDB
All DBs
Position
2914408..2915952
Genome browser
AA seq
514 aa
AA seq
DB search
MNDIIIPLVTGIVCLVVGVVIGFLYRKRVAEKEIGSAETEATRIINEAIKAGETKKREAI
LEAKDEIHKQRTEADRELKERRNETQQLERRLIQREEALDKKSDTLERKNEDLSRQLEAA
QKEKDDLARVKAEQLEKLEQIASMTRDEAREMLVQSIEAEATHDAAVKLREINQRVRDES
EQTAREIISTAIQRCAADHVSEATVSVVPLPNDEMKGRIIGREGRNIRTLETLTGVDLII
DDTPEAITLSSFDPVRREIARLSLEKLIVDGRIHPARIEEMVEKSRREVEQIIKSEGERA
TFETGIHGIHPELVKTLGRLRYRTSYGQNVLQHSIEVAHIAGMMASELGIDPVPARRAGL
LHDIGKAIDHEVEGSHVQIGVDLARKYKEAPGIVHAIEAHHGDVEAKTTIACLVQAADAI
SAARPGARRENLENYIKRLEKLEGIANETPGVSSSYAIQAGREIRIIVNPDKISDDAMVL
LARDVAKKIEDELDYPGQIKVNMVRETRAVDYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatcatcataccgctcgtgaccggtatcgtgtgtctcgttgtgggcgttgtc
attggctttttgtaccgcaagcgtgttgcggaaaaagagatcggctccgccgagaccgaa
gcgacgcgcatcatcaacgaggccatcaaggccggcgaaaccaaaaagcgggaagcgatt
ctcgaagccaaggacgagatccacaagcagcgcaccgaagccgaccgcgagctcaaggag
cgccgcaacgagacccagcagctcgagcgccgcctgatccagcgcgaggaggcgctggac
aagaaaagcgatacgctcgagcgcaaaaacgaagacctttcccgccagctggaggcagcc
cagaaggaaaaggacgacctggcccgtgtcaaggccgagcagctcgaaaagctggagcag
atcgccagcatgacccgcgacgaggcgcgcgagatgctggtccagtcgatcgaggctgag
gccacgcacgacgcggcggttaagctgcgcgagatcaaccagcgcgtcagggacgaaagc
gaacagaccgcgcgcgagatcatttccaccgccatccagcgctgcgcggccgatcatgtt
tccgaagcgaccgtatcggtcgtcccgctgcccaacgacgagatgaagggccgcatcatc
ggccgcgagggccgtaatatccgcacgctcgaaacactgaccggcgtggacctgatcatc
gacgacacgccggaggccattacgctttcctcgttcgaccctgtgcgccgcgagatcgcg
cgcctgagcttggaaaagctgatcgtggatggacgcatccatccggcacgcatcgaggaa
atggtggaaaaatcccgccgtgaggtggagcagatcatcaaatccgagggcgaacgcgcc
acctttgaaaccggtatccacggcatccatcccgagttggtcaaaacgctcggccgcctg
cgctaccgcaccagctacggccagaacgtgctgcagcattcgattgaggtcgcgcacatc
gccggcatgatggccagcgaactgggcatcgaccccgtacccgcgcgccgcgccggcctg
ctgcatgacatcggcaaggcgatcgaccatgaggtcgagggcagccatgtgcagatcggc
gtcgacctggcccgtaaatacaaggaggcgcccggcatcgtccacgcgatcgaggcgcac
cacggcgacgtggaggccaagaccaccatcgcctgcttggtgcaggcggcggacgcgatc
tccgcagcgcgcccgggcgcgcgccgcgagaacctggaaaactatatcaagcgcctggaa
aagctggagggcatcgccaacgaaacgcccggcgtttccagctcgtacgccatccaggcg
ggccgtgagatccgcattatcgtcaatccggataagatttcggacgacgcgatggtgctg
ctcgcccgcgacgtggccaaaaagatcgaggatgagctggattatcccggccagatcaag
gtcaatatggtgcgtgagacccgcgcggtcgattacgccaagtaa
DBGET
integrated database retrieval system
