Iodobacter ciconiae: EJO50_01175
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Entry
EJO50_01175 CDS
T05767
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
iod
Iodobacter ciconiae
Pathway
iod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EJO50_01175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iod03021
]
EJO50_01175
03400 DNA repair and recombination proteins [BR:
iod03400
]
EJO50_01175
Enzymes [BR:
iod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EJO50_01175
Transcription machinery [BR:
iod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EJO50_01175
DNA repair and recombination proteins [BR:
iod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EJO50_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AZN35217
UniProt:
A0A3S8ZNT6
LinkDB
All DBs
Position
279859..280065
Genome browser
AA seq
68 aa
AA seq
DB search
MARVTVDDCLNRIENRFDLTLAAAYRARQIANGSTPQIEHNGREKPTVLALREVAAGLVS
RDILIKRS
NT seq
207 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagttaccgtagacgattgcctcaaccgcatcgaaaatcgttttgatttgact
ttagcagcagcttatcgcgctcgtcagattgccaatggttctactccacagattgagcac
aacggccgtgaaaagccgactgtactcgcactgcgtgaagtagctgcaggtttggttagt
cgcgacattctgattaagcgctcttaa
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