Iodobacter ciconiae: EJO50_03240
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Entry
EJO50_03240 CDS
T05767
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
iod
Iodobacter ciconiae
Pathway
iod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EJO50_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iod03400
]
EJO50_03240
Enzymes [BR:
iod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EJO50_03240
DNA repair and recombination proteins [BR:
iod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EJO50_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DUF745
Motif
Other DBs
NCBI-ProteinID:
AZN35586
UniProt:
A0A3S8ZQ39
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All DBs
Position
complement(728918..730273)
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AA seq
451 aa
AA seq
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MSLSSTNSVILTVTELNRRAKTLLESSFPLLWVAGEISNFKRYDSGHCYFSLKDGNAQVR
CVMFRNKAALINFQPREGMQLEARALVSLYEARGDFQLTIEALRPAGLGALFAAYEKLKQ
KLESEGLFASEHKKTLPVFPQAVGIITSPAAAALSDVIAALKRRMPGLPIILYPCPVQGL
DAAPQIASAIKKASTRKEVDVLILCRGGGSLEDLWAFNEEVVARAIATCTIPIVSGVGHE
TDFSIADFVADVRAATPTAAAELVSPNRSEWQTKLARQQSLLHRAAERQLQSKMQSLDVL
SRRLQHPGERLRQQKSHLQALSHRLHLAPIRVLEKNNYRLKQLSQSLNHLKPSPERQQAH
LQRLSHQFLQAMPRLLEQRKQKLAMLAARLEPWNPQTVLARGYALVSRPDGQLVRHGAQL
SHGEPLSLQFVDSAVDVRVTKDLGTQGTLEI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtcaagtacaaatagcgtcattttaaccgtcacagaactcaaccgccgcgcc
aaaactctactggaaagtagttttcctttgttgtgggtggcaggtgaaatttcaaacttc
aaacgctatgactctgggcattgttacttcagcttaaaagatggaaatgcccaggtaaga
tgcgtgatgtttagaaacaaagctgccttaatcaatttccagcctcgtgaagggatgcaa
cttgaagcacgtgcgctggtttccctatatgaggcacggggtgacttccaactgaccatt
gaagcactacgaccagcagggctgggcgcactttttgccgcctacgaaaaactcaaacaa
aaactggaaagtgagggtttatttgcaagcgagcataaaaaaacactccccgtttttccg
caagcagtgggtattatcacctcccccgccgccgccgcactttctgatgtaatcgcagca
ctaaagcgccgtatgcccggcctgcccatcatcctttatccctgccccgtgcaagggctg
gacgccgcaccacaaattgccagtgccatcaaaaaagcaagcacgcgaaaagaagtcgat
gttcttatcctgtgccgcggaggcggaagcctggaagatttatgggctttcaatgaagaa
gttgttgcccgtgcaattgcaacctgcacaattcccatcgtaagtggtgtaggccatgaa
accgactttagcattgccgattttgttgctgacgtacgggctgccacccccactgcagca
gcagaattggtcagccccaaccgtagcgaatggcaaaccaaacttgcgcgccagcaaagc
cttttgcatcgggccgctgagcgccagctacaaagcaagatgcaaagcctggacgtccta
tcaagacgtttacaacatcccggagaacgcttacgccagcaaaaaagtcacttgcaagcg
ctaagccatcgcttacatctggcaccgattcgggtactggaaaaaaacaattaccgcctt
aagcagctctcacaaagcctgaatcatctaaaaccaagccccgaacgccagcaagcacac
ttgcaacgcctatcccatcagtttttgcaggccatgccccggctgctggaacaacgcaaa
caaaaactggccatgctggcagcccggcttgagccatggaacccgcaaaccgtattagcc
cgcggttacgcgcttgtaagccgccctgatggccagcttgtccgccacggggcacagctc
agccatggcgaaccgctatcactgcaatttgtagatagcgccgtcgacgttcgcgtaact
aaagacttgggtacacagggaacgctagaaatttaa
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