Iodobacter ciconiae: EJO50_03370
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Entry
EJO50_03370 CDS
T05767
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
iod
Iodobacter ciconiae
Pathway
iod02020
Two-component system
iod02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJO50_03370
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EJO50_03370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
iod02022
]
EJO50_03370
02035 Bacterial motility proteins [BR:
iod02035
]
EJO50_03370
Two-component system [BR:
iod02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
EJO50_03370
Bacterial motility proteins [BR:
iod02035
]
Flagellar system
Flagellar assembly proteins
Others
EJO50_03370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
AAA
AAA_3
HTH_30
FleQ
AAA_22
HTH_28
AAA_19
ATPase
HTH_23
TIP49
CggR_N
AAA_18
OKR_DC_1_N
nSTAND3
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AZN35609
UniProt:
A0A3S8ZQ66
LinkDB
All DBs
Position
756196..757554
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AA seq
452 aa
AA seq
DB search
MNLPILIVEDDDSLREALADTLELGGYSVLVAEDGKDALSVLECHRVGLVLSDVQMQPMD
GEKLLQEIKLIYPYLPVILMTAYGVIEKAVAALHSGACHYLPKPFEPDRLLQEVAKYMLP
DSDDDEVIAEDPAMLSLLEMARRVALSEASVMITGESGTGKEVLAQFLHRNSGRANRPFV
AINCAAIPEQLLESTLFGHEKGSFTGAATQHLGKFEQANGGTLLLDEISEMPLALQAKLL
RVLQEREVERVGGNKPVQIDIRVLATSNRDMKLEVLAGRFREDLFYRLNVFPLHLPSLRE
RSNDILPLAKAMLARHAARQKRRVPTLSLAAEIVLLANEWEGNIRELDNVMQRALILAPG
DEIAVEHLYLPQIFSAKAANIADVSVLTGLLPCDDAPTVVSDIKELEKRHILETLRSLGG
ARKSTAEKLGMSERTLRYKLQQYREQNPDLSI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaccaatattaattgttgaagatgatgatagtctaagagaagcacttgctgac
acgctggaattaggtggctattcggttcttgttgctgaagacggcaaagatgcactaagt
gtattagagtgccatcgagtggggctggtgttatctgatgtgcagatgcagcctatggat
ggtgaaaaacttctgcaagaaattaagcttatttacccttatctacctgttattttaatg
acggcctatggcgtgattgaaaaagcggtagccgcattacactccggtgcatgtcattat
cttcccaagccttttgagccagaccgcctgcttcaggaagtagccaaatacatgctgcct
gacagcgatgatgatgaggtgattgcagaagatccggcgatgcttagccttttagaaatg
gcacgacgcgtggctctttctgaggcttcggttatgattactggcgagtcgggcacaggt
aaagaggtcctggcacaatttttacaccgcaatagtggcagggctaatcgtccgtttgtt
gccattaattgtgcggctattcccgagcaattactggagtcaacgctgtttgggcatgag
aagggctcgtttaccggcgctgctactcagcatctgggtaaatttgagcaggcaaatggg
ggtactttgctgcttgatgagatttcggaaatgcctctggcattgcaggccaaattgctg
cgggtattgcaagagcgcgaagtggagcgtgtaggtgggaataagccggtgcagattgat
attcgcgtattggcaacgtctaatcgggatatgaagctggaagtgcttgccgggcgtttt
cgtgaagatttgttctatcgtttgaatgtttttcccttacatttaccgagcttgcgggag
cgcagcaacgatatcctgcccctggctaaagcgatgctggcaaggcatgctgcaaggcaa
aaacggcgcgtgcctaccttgtctttggctgccgaaattgtgcttttggccaatgaatgg
gagggcaatattcgtgaattagacaatgtgatgcagcgagcacttattctggctccgggt
gatgagattgctgtcgagcacctttatttgccgcaaattttttccgccaaggcggcaaat
attgccgatgtgtccgttttaaccggtttgttgccgtgcgatgatgcgccgactgtcgtc
agtgatatcaaagaactagagaaaaggcatatattggaaacactcaggtcgctcggtggt
gcgcgtaaatcgacggcagaaaagctgggcatgagtgaaagaacattacgttataaattg
cagcagtaccgtgaacaaaacccggatttatcgatttga
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