KEGG   Iodobacter ciconiae: EJO50_03460
Entry
EJO50_03460       CDS       T05767                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
iod  Iodobacter ciconiae
Pathway
iod00010  Glycolysis / Gluconeogenesis
iod00020  Citrate cycle (TCA cycle)
iod00260  Glycine, serine and threonine metabolism
iod00280  Valine, leucine and isoleucine degradation
iod00310  Lysine degradation
iod00380  Tryptophan metabolism
iod00620  Pyruvate metabolism
iod00630  Glyoxylate and dicarboxylate metabolism
iod00640  Propanoate metabolism
iod00670  One carbon pool by folate
iod00785  Lipoic acid metabolism
iod01100  Metabolic pathways
iod01110  Biosynthesis of secondary metabolites
iod01120  Microbial metabolism in diverse environments
iod01200  Carbon metabolism
iod01210  2-Oxocarboxylic acid metabolism
iod01240  Biosynthesis of cofactors
Module
iod_M00009  Citrate cycle (TCA cycle, Krebs cycle)
iod_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
iod_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
iod_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:iod00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EJO50_03460 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EJO50_03460 (lpdA)
   00620 Pyruvate metabolism
    EJO50_03460 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EJO50_03460 (lpdA)
   00640 Propanoate metabolism
    EJO50_03460 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EJO50_03460 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EJO50_03460 (lpdA)
   00310 Lysine degradation
    EJO50_03460 (lpdA)
   00380 Tryptophan metabolism
    EJO50_03460 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EJO50_03460 (lpdA)
   00670 One carbon pool by folate
    EJO50_03460 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iod04147]
    EJO50_03460 (lpdA)
Enzymes [BR:iod01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EJO50_03460 (lpdA)
Exosome [BR:iod04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EJO50_03460 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored NAD_binding_8 HI0933_like DAO 3HCDH_N FAD_binding_3 Thi4 2-Hacid_dh_C Lycopene_cycl
Other DBs
NCBI-ProteinID: AZN35625
UniProt: A0A3S8ZQ83
LinkDB
Position
778745..780181
AA seq 478 aa
MSKEFDVVVIGGGPGGYVAAIRASQLGFNTACIDATSDKDGKASLGGTCLNVGCIPSKAL
LQSSENYFNAAHHFGDHGISTGTLKMDVSKMLARKQEIITKNTGGIAYLFKKNKVTSFHG
VGAFKAKAGDAYLLEAKLADGTIEEITAKHVIIATGSSVRQLPGVTIDNHLVLDNEGALA
IPSVPKRLGVIGAGVIGLEMGSVWKRLGSEVTVLEAMPAFLGAADEQVAREAKKFLTKET
GLVINTGVKIGEIKAGKKDVTVHWTDTAGAEQVSVFDKLVVAIGRVPNTAGLNAEAVGLA
LTERGQIEVNDDCQSNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQHPHIDFNNIP
WVIYTSPEIAWVGKTEEQLKAAGVEYKKGQFLFSANGRALALGEGKGFVKMLADKTTDRI
LGVHIVGPFASELIAEAVVAMEFNASSEDIARIVHAHPSLSEALHEAALACDKRGLHS
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagcaaagaatttgacgttgttgtaatcggcggtggccctggtggctatgtggcggcg
attcgcgcctcacagctgggttttaacacggcttgtattgatgccacctcagacaaagac
ggtaaggccagcctgggcggtacatgtctgaatgtgggttgtatcccttccaaagcactg
ttgcaatcgtcagaaaactactttaatgcagcgcatcattttggcgaccatggtatctct
accggcacgctgaaaatggacgtgtccaagatgctggcgcgcaaacaagagattattacc
aaaaacaccggcggcattgcttatctctttaaaaagaacaaagttacgtctttccatggc
gtgggcgcgtttaaagccaaagcgggcgatgcgtatctgctggaagccaaactggctgac
ggtacgattgaagaaatcactgccaagcacgtgattattgcgactggctctagcgttcgc
caattgccaggggtaaccatcgataaccatctggtgttggataacgaaggcgcgctggcg
attccaagcgttccaaaacgcttgggcgtcattggcgctggcgtgatcggcttagaaatg
ggctcagtctggaagcgtctgggtagtgaagtgacggtgctggaagcgatgccagctttc
ctgggcgcagcggacgagcaagtggcccgcgaagccaaaaaattcctgactaaagaaacc
ggcctcgtgatcaataccggcgttaaaatcggtgaaattaaggccggtaaaaaagacgtc
actgtgcactggaccgatacagcaggtgcagagcaagtcagcgtatttgataagctggta
gtggcgattggccgtgtaccaaatacagctggcctgaatgcggaggctgttggcctcgcg
cttaccgagcgcggccagattgaggtgaacgacgattgccagagcaatcttccaaacgtc
tgggcgattggtgatgtagtgcgtggcccgatgctggcgcataaagcatcggatgaaggt
gtggccgtggctgagcgtatcgctggccagcatccgcatattgactttaacaacatccct
tgggtgatttacaccagcccggaaattgcgtgggtgggtaaaaccgaagagcagctcaaa
gcagcgggcgttgaatacaagaaaggtcaattcttgttctccgccaatggccgtgcttta
gcgctgggtgagggtaagggttttgttaaaatgctggcagataagacaactgatcgtatt
ttaggtgtgcatatcgttggcccatttgcttcagagctgattgctgaagcggtggtagcg
atggagtttaacgcctcgtcagaagatattgcccgtattgtgcacgctcatccgtccttg
tctgaagccttgcacgaagcggctttagcttgcgataagcgtggtttgcatagctaa

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