Iodobacter ciconiae: EJO50_04125
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Entry
EJO50_04125 CDS
T05767
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
iod
Iodobacter ciconiae
Pathway
iod00260
Glycine, serine and threonine metabolism
iod00630
Glyoxylate and dicarboxylate metabolism
iod00670
One carbon pool by folate
iod00785
Lipoic acid metabolism
iod01100
Metabolic pathways
iod01110
Biosynthesis of secondary metabolites
iod01200
Carbon metabolism
Module
iod_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EJO50_04125 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EJO50_04125 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EJO50_04125 (gcvP)
00670 One carbon pool by folate
EJO50_04125 (gcvP)
Enzymes [BR:
iod01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
EJO50_04125 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AZN35734
UniProt:
A0A3S8ZQJ3
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Position
complement(926248..929118)
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AA seq
956 aa
AA seq
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MTTASLCRLEDHAAFVARHIGPNAAEEAAMLATLGYATRSDLIKNIVPAAIHRQDALPLG
EFTQAKSEAEALATLKAIASKNVLKKSMIGQGYYGTHTPSVILRNILENPAWYTAYTPYQ
PEISQGRLEAIINFQQMITDMTGMAIANASMLDEGTAAAEAMTLLLRMSKSKSTIFYVAA
DVLPQTREVIATRAAPLGIEVRTGLGEAGDGFGVLLQYPGVNGDVPDYRALVADLHAKGT
LVVVAADLLALTLLAAPGEWGADVVVGNSQRFGVPLGFGGPHAGFLATRDEFKRSMPGRL
VGITIDAQGKSAYRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPSGLKRIA
HRVHRLTSILAAGLTQLDAKIINSSWFDTLTLSVSDAAAVHALAHSHGINLRSIDAHTVG
LSLDETTTRKDVAALWHVFAAGKPLPTVDAIDAEIAGALPGELLRQSDFLTHPTFNRYHS
ETEMMRYLRSLADKDLALDRTMIPLGSCTMKLNAASEMMPVTWPEFANVHPFAPNAQTAG
YREMITQLEAMLCAATGYAGVSLQPNAGSQGEYAGLLIIKAYHASRNDAGRDIVLIPASA
HGTNPASAQMAGLTVVVVACDEAGNIDLADLRAKADKHSANIAAIMITYPSTHGVFEESV
KEVCEIVHGHGGQVYIDGANMNAMVGLCAPGQFGGDVSHLNLHKTFCIPHGGGGPGVGPV
AVAAHLVPFLPNQQSSGYERNPQGISAVSAAPYGSAAILPISWMYIAMMGSEGLKSATEV
AILNANYIAKRLAPFYPVLYSGHDGLVAHECILDLRPLKELSGISNEDVAKRLMDYGFHA
PTMSFPVPGTLMVEPTESESKAELDRFIDAMIAIRSEIDRVVSGEWTLADNPLVNAPHTV
EVLTSETWEHGYTRATAAFPLESIKRNKYWPPVSRADNVYGDRNLFCACLPMSDYE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgcatctctttgccgtcttgaagatcacgccgcttttgtggcccgccatatc
ggccctaatgctgcggaagaagccgccatgctggccacgctgggctacgctacacgctcc
gatctgattaaaaatatcgttcctgccgccattcaccgtcaggatgctttgccgctgggt
gaattcactcaggcgaaaagcgaagccgaggctttagccacactgaaagccattgcaagc
aagaatgtgctcaaaaagagcatgattggtcagggctattacggcacccatactcccagc
gtgattttgcgcaatattttagaaaacccggcctggtacacggcttacaccccataccag
ccagaaatcagccaaggccgtctggaagcgattattaacttccagcaaatgattaccgat
atgaccggcatggcgattgccaatgcatccatgctggacgaaggcaccgctgctgccgaa
gcgatgacgctattgctgcgaatgagcaaaagcaaatcgaccattttctatgtcgccgcc
gatgtgctgccacaaacccgcgaagtgattgccacccgtgcagcgccactgggcattgaa
gtgcgcacaggtctgggtgaagcaggcgacggttttggtgtactactgcaataccctggg
gtcaacggcgatgtgccggattaccgcgcactggtggctgatttacacgctaaaggcact
ttagtggtggtagccgctgatctgctggcgctcaccctgctggcagcgcccggcgaatgg
ggcgcagacgtagtggtaggtaatagccagcgctttggtgtaccgctcggctttggtggc
ccgcacgcagggtttttggccacacgcgatgaattcaaacgctcgatgcctggccgtctg
gtcgggattaccattgatgcgcaaggcaagagcgcttaccgccttgccctgcaaacccgc
gagcaacatatccgccgtgaaaaagccacatccaatatctgtactgcccaagtattgctc
gccgtcatggccagcatgtacgccgtttaccacggcccaagcggtttaaaacgcattgct
caccgtgtacaccgtctgaccagcattttagctgcaggcttaacgcagcttgacgctaaa
attatcaatagcagctggtttgatacgctgacgctttcagtcagcgatgcggctgcagtg
catgcccttgctcattctcacggtattaacttacgcagtattgatgcccatacggtaggc
ctgtcgctggacgaaaccaccacccgcaaagacgtagccgcgctctggcatgtatttgca
gcaggcaaacccctgccaaccgtagacgccatcgatgcagaaatcgcaggagccttgccg
ggcgaactgctgcgccagtccgattttctgactcaccctacctttaatcgctatcactcc
gaaaccgagatgatgcgttacctgcgtagcctggcagataaagacctagcgctggatcgc
accatgattccgctgggctcttgcaccatgaagctcaatgctgccagcgaaatgatgccg
gttacctggccggaatttgccaatgtccacccgtttgcaccaaacgcacaaacagcgggc
taccgcgaaatgatcacccagcttgaagccatgctttgcgcggcaaccggctacgcgggc
gtcagcctgcagcctaatgccggtagccagggagaatacgcgggtctgttgattatcaag
gcttaccacgcatcgcgtaacgatgctggccgcgatattgtgctcatccccgcttctgct
cacggcaccaatccagcctctgcacagatggctggcctcaccgttgtggttgttgcttgc
gatgaagcaggcaatatcgatctggccgatttgcgtgccaaagccgataagcacagcgcc
aatattgccgccattatgatcacctacccaagcacgcacggcgtgtttgaagaatcggtt
aaggaagtgtgcgaaatcgtacacggccacggcggccaggtgtatatcgacggcgcaaat
atgaatgccatggtgggcctatgcgcacccggccagtttggcggcgatgtaagccactta
aacctgcacaaaacattctgcattcctcacggcggcggcggaccgggtgttggcccggta
gcggtagctgcacacttagtaccattcttgcctaatcagcaaagcagcggctatgaacgt
aatccacaaggtataagtgcagtcagcgcagcgccttacggctcggcagcgattttgcct
atctcatggatgtatatcgccatgatggggagcgaaggactgaaaagcgcaactgaagtg
gcgattctgaacgccaactacatcgccaaacgccttgcgcctttctaccctgtgctttac
agcggccacgatggtttagttgctcacgaatgtattctggacctgcgcccactgaaagag
ctgagcggcatcagcaatgaagatgtggcaaaacgcctgatggattatggttttcacgcg
ccaaccatgagcttcccggtaccgggcacgctgatggtggagccgaccgaaagcgaatca
aaagcagaactcgatcgctttatcgacgccatgattgccatccgcagcgagatcgatcgc
gtggtgagtggcgaatggacactggcggacaatccgctggtgaacgcaccgcacacggta
gaagtattgactagcgagacgtgggaacacggctacacacgcgccacagccgccttcccg
ctggaaagcataaaacgtaataaatactggccaccggttagccgtgcagacaacgtctac
ggcgatcgcaatctattttgcgcttgcttaccgatgtctgattacgaataa
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