Iodobacter ciconiae: EJO50_07875
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Entry
EJO50_07875 CDS
T05767
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
iod
Iodobacter ciconiae
Pathway
iod03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EJO50_07875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iod03019
]
EJO50_07875
03009 Ribosome biogenesis [BR:
iod03009
]
EJO50_07875
03036 Chromosome and associated proteins [BR:
iod03036
]
EJO50_07875
Enzymes [BR:
iod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EJO50_07875
Messenger RNA biogenesis [BR:
iod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EJO50_07875
Ribosome biogenesis [BR:
iod03009
]
Eukaryotic type
90S particles
RNase
EJO50_07875
Prokaryotic type
rRNA processing factors
EJO50_07875
Chromosome and associated proteins [BR:
iod03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EJO50_07875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AZN36415
UniProt:
A0A3S8ZSL3
LinkDB
All DBs
Position
complement(1791806..1792570)
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AA seq
254 aa
AA seq
DB search
MSVVLPSERLLKVLSYSFKEPGLFKQALTHRSFSSTHNERLEFIGDGILNSLIARALFLT
FPKLPEGDLSRLRASLVRQEALASIASELNLGDFIWLGEGELKSGGHRRPSILADALEAI
FGAIWLDGGFDAVDTVVNALFATRIAAIDPLLGAKDAKTSLQEWLQARRYMLPAYTILRQ
DGESPDQIFEVSCSIAEAKLLTKGVGTSRRAAEQLAAESALVTLREQFPGKHKSDNAPLK
SKHAAKLAAKGKRI
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgttgttcttccttcggagcgcctgttaaaggtgctctcttattcttttaaagag
cccggactctttaagcaggctttaacccatcgcagtttttcttctacgcataatgagcgc
ctggagtttattggcgatgggattttaaattcgctgattgcccgggctttatttttgact
tttcctaagctgcctgaaggggatttatcccgcttacgtgccagtttagtgcgtcaggag
gctttggcaagcatcgccagcgagctgaacttgggcgattttatctggttaggcgagggt
gagttaaaaagtggtggccaccgccgcccctcgattcttgccgatgccctggaagctatt
tttggggcaatctggcttgatggtggttttgacgccgttgatacggtcgttaatgcattg
tttgcgacaagaattgcggccattgatccgctattgggtgcaaaagacgctaaaaccagt
ttgcaagagtggctgcaggcgcgtcgctatatgctaccggcgtacactatcctcaggcag
gatggtgaatcgccagatcagatttttgaagtgagttgctctattgctgaggctaaatta
ctcactaaaggagtcggcacgagccgccgtgctgcggagcaattagctgccgaatccgca
cttgtcacgctaagggagcagtttcccggtaaacataaatcggataacgccccgttaaaa
agtaaacacgctgccaaattggcagcaaaaggtaaacgtatatga
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