Iodobacter ciconiae: EJO50_10160
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Entry
EJO50_10160 CDS
T05767
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
iod
Iodobacter ciconiae
Pathway
iod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJO50_10160 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iod03019
]
EJO50_10160 (pcnB)
Enzymes [BR:
iod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EJO50_10160 (pcnB)
Messenger RNA biogenesis [BR:
iod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EJO50_10160 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AZN36813
UniProt:
A0A3S8ZTH5
LinkDB
All DBs
Position
2335256..2336566
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AA seq
436 aa
AA seq
DB search
MIRKLIGKVLRRPGKRVLHAKHYGIRRDQLHSGALKVCDRLQDAGFEAYIVGGAIRDLML
DKSPKDFDVATSATPEQVRHVFHRSRIIGRRFRIVHVPFGEEIIEVTTFRGASEAPTDAS
GRILRDNAYGDIEEDASRRDFTVNALYYNPRTEEILDFHHGVSDLENKRLTIIGDPDIRY
REDPVRMLRAIRLSAKLGLSIAPATKTPILIHAKLLENIPSARLFDEMMKLLLSGSAWTC
LMSLRENGLHKLLFPLLEKQLSRPDTTTFLRKALESTDQRINEDMPVSAGYIFAALLWHE
VEADWIKRQAAGEYPVPALVEAMNTVESKVQKRMAIPNRYGAAMKEIWLLQPRFEQRVGT
RPWRLMEQQRFRAAYDFLMLRAECGMVENSLGDWWTRFQNADEDTRMALMAAATDKPAGA
HAKKRRRRKPNNPKGE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtaaattgatcggcaaggttttacgccgcccaggcaaacgtgtgcttcacgca
aaacactacggcattcgccgtgaccaacttcattctggcgcactcaaagtgtgcgatcgc
ttgcaagatgctggctttgaagcctacatcgttggcggtgccatacgggatttgatgctg
gataaatcacccaaagattttgatgtggccaccagtgccacgccagagcaggtacgccac
gtattccaccgctcgcgcattattggccgccgttttcgcattgtgcatgtgccctttggt
gaagaaatcatcgaagtcaccacctttcgtggagcaagcgaagccccgactgacgcttcg
ggccgcatcttgcgcgacaatgcctatggtgatattgaagaagatgcttcccgccgtgat
ttcaccgtcaacgcgctgtattacaacccgcgcacagaggaaattctggacttccaccat
ggcgtgtctgatctggaaaacaaacgcctgactattatcggcgacccggatatacgttac
cgcgaagacccggtgcggatgttgcgcgccattcgtctttcggccaagctaggtctgagt
attgcacctgctaccaaaacaccgattctgattcacgccaagcttctggaaaacatccct
tcagcacgtttatttgatgaaatgatgaagctgttattgtccggcagtgcatggacgtgt
ttgatgtcgttgcgcgaaaatggcctgcataagctgctgtttcctctattagaaaaacaa
ctctccaggcccgataccaccacttttttacgcaaagctttagagagtaccgatcagcgc
attaatgaagacatgcctgtttctgccggttatatttttgcagccctgctctggcatgaa
gtagaagctgactggattaaacgtcaggctgcgggtgaatatcctgtgcccgcccttgtt
gaagccatgaatacggttgagagcaaggtgcaaaagcgcatggcgattccgaatcgctac
ggcgcggccatgaaagagatctggctgttgcaaccgcgttttgagcagcgtgtaggcact
cgcccatggcgcttgatggagcaacaacgctttcgtgcagcctacgactttttgatgctg
cgcgcagagtgcggcatggttgaaaactcgctgggtgactggtggacgcgttttcagaat
gccgacgaagacacacgcatggccctgatggctgccgctacggacaaaccagcgggagcg
catgccaaaaagcgccgccgccgtaagccaaacaacccgaaaggcgaataa
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